Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01495 ATGCAGGTAGCTCTGATTAAAAGTGATGAAAGAGAGGATCTTAAAGTGTTGGCAACTAGTGCTGCATCAGCTTTGGCTGCTAGGAAGCCTTATTGGGTAATTGATGAAGAATTGGGCATGGGCTATCGTGAGATGAAATCTGCATCAATTATGACTAAATCTTCGCTTGGAGCCTTGAATTCAATATTATCCGATGAAGTCGTTGTTGTTTCCAACGCTCCCACCCTCATTATTGGAATTGTTGTGTCCCTTGGCTCCCAAGAGCAAACTACTCCTTCAATTGTAGAAGAGGAGGTATGCCTGGGTGCATGGGTCTTCGTTGTAGTTAGGGAAGTATGCCAAATGGGTTGTCACATAGTTTGGGAGATATACTCTCTGAAGTTACCTGGAAATCCCAAATTGGGTGAAGGGAAGCCTGATCATCAAAATCATGTTGTTATATTTACCCGTGGCAATGCAGTCCAAACAATTGACATGAATCAGGATAACTATTTTGAGGAGGCTTTAAAGATGAGGAACCTTCTTGAGGAATTTCATTCTGATCATGGGCTTCGTCCTCCTACTATTCTTGGTGTTAGAGAACATGTCTTTACTGGAAGTGTCTCATCTTTGGCATCATTTATGTCCAGTCAAGAAACTAGTTTTCTGACTATGGGGCAGCGGGTTTTAGCAAGTCCATTGAAGGTTCGAATGCATTATGGGCATCCTGATGTTTTTGATAGAATTTTTCACATAACCCGTGGTGGTATCAGTAAGGCTTCCCGTGTTATCAACATTAGTGAAGACATCTATTCTGAAAATTTGCTGGTTGGTAAGGGAAGAGATGTTGGGCTCAATCAGATTTCACTATTTGAAGGAAAAGTTTCAGGTGGTAATGGTGAACAAGTTCTCAGCCGTGATGTATACAGACTTGGGCAGCTTTTTGATTTTTTCCGGATGATGTCGTTTTATTTTACAACAGTTGGATACTACTTCTGTACCATGGTATGCCCATTTATGTGTCATTTATTTTTGTTGTTTGAACTAACAGTGCTGACTGTGTATGCCTTTCTATATGGGAAAGCCTATCTGGTAGCTCTGATTAAAAGTGATGAAAGAGAGGATCTTAAAGTGTTGGCAACTAGTGCTGCATCAGCTTTGGCTGCTAGGAAGCCTTATTGGGTAATTGATGAAGAATTGGGCATGGGCTATCGTGAGATGAAATCTGCATCAATTATGACTAAATCTTCGCTTGGAGCCTTGAATTCAATATTATCCGATGAAGTCGTTGTTGTTTCCAACGCTCCCACCCTCATTATTGGAATTGTTGTGTCCCTTGGCTCCCAAGAGCAAACTACTCCTTCAATTGTAGAAGTGACAGATAAGTAA 1368 0.4094 MQVALIKSDEREDLKVLATSAASALAARKPYWVIDEELGMGYREMKSASIMTKSSLGALNSILSDEVVVVSNAPTLIIGIVVSLGSQEQTTPSIVEEEVCLGAWVFVVVREVCQMGCHIVWEIYSLKLPGNPKLGEGKPDHQNHVVIFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFHSDHGLRPPTILGVREHVFTGSVSSLASFMSSQETSFLTMGQRVLASPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYSENLLVGKGRDVGLNQISLFEGKVSGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTMVCPFMCHLFLLFELTVLTVYAFLYGKAYLVALIKSDEREDLKVLATSAASALAARKPYWVIDEELGMGYREMKSASIMTKSSLGALNSILSDEVVVVSNAPTLIIGIVVSLGSQEQTTPSIVEVTDK 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01495 455 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 107 364 - -
Vimu7g01495 455 Pfam 1,3-beta-glucan synthase component 121 346 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01495 Vimu-Chr7 14142371 14155771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01495 122 379 Cell Wall Biosynthesis AT3G07160 72.894 6.02e-129 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01495 K11000 - gmx:100811473 411.764