Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01475 ATGCAATCCCGGCATTTCTATGACTCAAATGGTTTGAACTCTACCCCAAAAGTCTCCACTATTAGTGCGGCCAAGACGGAGATATCATCAATGGATGCTTCTATCAGAAGTAGCTCATCCAGAGAGGCTGATCGCTCTGGTGATTTATCAATCAGCAATGCCAGTGAGTTGGAGACTGAGTGGGTTGAACAGGATGAACCTGGGGTTTACATTACAATCAGAGCATTCCGAGAAAAATTTGGAGAAATGCATGCTAGATTATGGTGGGAGGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 306 0.4412 MQSRHFYDSNGLNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDLSISNASELETEWVEQDEPGVYITIRAFREKFGEMHARLWWEENRARIHEQYL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01475 101 PANTHER PROTEIN BREVIS RADIX-LIKE 1 4 101 IPR044532 -
Vimu7g01475 101 Pfam Transcription factor regulating root and shoot growth via Pin3 58 100 IPR013591 -
Vimu7g01475 101 ProSiteProfiles BRX domain profile. 59 101 IPR013591 -
Vimu7g01475 101 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01475 Vimu-Chr7 13978857 13981708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01475 31 101 Major Intrinsic Protein MIP AT1G31880 50.000 7.40e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01475 - - gmx:100777018 173.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01475 7 13978857 13981708 Vimu7g01475 7 13978857 13981708 ECH
Vimu7g01475 7 13978857 13981708 Vimu10g00445 10 3318820 3323247 PCT