Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01474 ATGCTTACGTGCATAGCTCGTCCGAAGAAACCTGACGAGTCAGATCCAAACAACGCCACAAGCGCTGCTAAATCGCAAGCCATCAAATCCCTTACTTCTCAGATAAGGGATATGGCGTTGAAAGCTTCGGGTGCGTACAAGCATTGCGCTCCGTGCACAGGGCCAGCGGCGCAGGGACGAGTGCGGGGCAACACCGAGTCGGACGCGGACTCTGACCGGTTCCGGTGGTCGTACCGGCGGACAGGGAGTTCAAGCTCGACGACGACTCGGACGTGGGGGAAGGAGATGGAGGCGCGGCTAAAGGGGATATCGAGCGGGGAGGGGACGCCAAACTCTGCGAGCGGACGGCGAGCGGAGCCGTTGGTGCTGTTCGTGGAAGAGAACGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCTGGCGTTTTGATTACCTTCGTGTCATTGCCTCGTGGCGGTAACGATCTCAAACGCATACGGTTCAGGTACGTACTACTGCGTTATGTTACGATACGTTATGTTACGCGTCTCGTGCTGTGTTTGAAATGGGGGCGACATTACCCGTGGGTTATGGTTGGTCGCTGTTTTGATCGTCCAGACTGTGATGATGACAACGAGTGCCTTTTGCTACGGTGGATTGTCAATTTCTCACACCTCATTAGTAGGGTCGTTTTCGCCTCTTTTGCATTCTCTTCTTTGGTAAATCTGGAACACCTCACTTCAGGATAG 726 0.551 MLTCIARPKKPDESDPNNATSAAKSQAIKSLTSQIRDMALKASGAYKHCAPCTGPAAQGRVRGNTESDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRAEPLVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFRYVLLRYVTIRYVTRLVLCLKWGRHYPWVMVGRCFDRPDCDDDNECLLLRWIVNFSHLISRVVFASFAFSSLVNLEHLTSG 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01474 241 Pfam Transcription factor BRX N-terminal domain 20 52 IPR027988 -
Vimu7g01474 241 Pfam Transcription factor regulating root and shoot growth via Pin3 131 161 IPR013591 -
Vimu7g01474 241 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 161 IPR044532 -
Vimu7g01474 241 MobiDBLite consensus disorder prediction 1 27 - -
Vimu7g01474 241 ProSiteProfiles BRX domain profile. 131 187 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01474 Vimu-Chr7 13974974 13975856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01474 1 186 Major Intrinsic Protein MIP AT1G31880 36.318 1.37e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01474 - - gmx:100794109 290.041