Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01467 ATGATGGTTGGCAGTGCCATTTATGACCAGAGCACATTTGGTTGCATTCCTCTTCTCTTCAAGAACCTGTCTGCGCCAGTGAATATTATTGTAGGTTCTCATGTCTGGATTGAAGATCCAGCACAGGCGTGGGTTGATGGAGAAGTTTCCAAAATCAATGGTGAAGAAGTCCATGTTCGCACCACAGCTGGGAAAATTGTTGTAAAAAATATTTCAAAGGTTCTTCCCAAGGATAATGAGGCCCCTCCTGGAGGTGTAGATGACATGACAAAATTGTCTTACTTGCATGAACCAGGTGTTCTGCACAATTTGGCAGCTAGATACGAACTCAATGAAATCTACACATATACCGGAAATATCCTGATTGCAATAAATCCTTTTCAAAGGTTACCACATCTATATGATACTCACATGATGGAACAATACAAAGGAGCTGCATTTGGAGAATTGAGTCCCCATGTTTTTGCAGTTGCAGATGTTGCATACAGGGCGATGATTAATGAGGGGAAAAGCAACTCAATTCTGGTTAGTGGTGAGAGTGGGGCTGGAAAGACAGAGACAACAAAAATGCTTATGCGGTATCTTGCATATCTTGGGGGTCGATCTGGAGTTGAAGGGCGAACAGTTGAACAACAAGTTCTAGAATCTAATCCAGTTCTTGAAGCATTTGGCAATGCCAAAACTGTTAGAAACAACAATTCAAGGTGGGTGTTGACAGCCACATGTCGCTTTGGTAAATTTGTTGAGATACAATTTGACAACAAGGGAAGAATATCGGGTGCTGCTATACGGACATATTTGCTTGAAAGGTCCCGTGTCTGTCAAATTTCAGATCCTGAAAGAAATTACCATTGCTTTTACCTTCTATGTGCAGCACCAGCTGAGGAAAAAGAGAAATATAAACTGGAAAGTCCTAGCTCCTTTCATTACTTAAATCAATCCAACTGCTACGCACTGGATGGAGTGGATGATGCCGAGGAATATCTTGCAACTCGAAGGGCAATGGATGTTGTTGGAATAAGTGAGGAGGAGCAGGAGGCTATTTTCAGAGTTATTGCAGCAATTTTGCATCTTGGAAACATTGAATTTGCAAAAGGAGAGGAGATCGATTCTTCTGTCATTAAGGATGAGAAGTCTAGGTTCCATCTTAATGTTACTGCTGAACTTCTAAAGTGTGATTGTAAGAGCTTGGAAGATGCATTGATCAAGCGTGTGATGGTAACACCGGAGGAGGTTATTACAAGAACCCTTGATCCTATTGCAGCTCTTGGTAGCAGGGATGCATTGGCTAAAACCATTTATTCTCGTTTGTTTGATTGTCTCATCATTGCTTCCAGGCTTGTTGAGAAGATTAACAATTCGATTGGACAAGATCCAAATTCGAAATCTATTATTGGAGTTCTTGATATCTATGGGTTTGAAAGTTTTAAATTCAATAGTTTTGAGCAGTTCTGTATTAATTTTACAAACGAGAAGCTGCAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAGAAATTAATTGGAGTTACATAGAATTTGTTGACAACCAAGATGTTTTGGATTTAATAGAGAAGAAACCTGGAGGAATAATTGCCCTTCTTGATGAAGCTTGTATGTTTCCCAAGTCTACACATGAAACATTTGCTCAGAAATTGTATCAGACATTCAAAAACAACAAGCGCTTCATCAAACCTAAGCTTTCTCGGACTAGTTTTACCATATCCCATTATGCAGGCGAGGTGACATATCTAGCTGACATGTTTCTTGACAAAAACAAGGATTATGTAGTGGCAGAACATCAGGATTTGCTCATAGCCTCAAAATGCTCATTTGTGGCTGGTCTATTCCCCCCTTCTCCAGAGGAGTCTTCGAAATCATCAAAGTTCTCTTCAATAGGATCTCGCTTCAAGCTACAACTTCAATCTTTGATGGAGACCCTAAATTCAACAGAACCTCACTATATCAGATGTGTGAAGCCAAATAACGTTCTCAAGCCTGCTATTTTTGAAAATCTCAACATTATTCAACAATTGCGGTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGGTATCCTACCAGACGAACATTCTATGAATTTCTAAACCGATTTGGTGTTCTTGCCCCAGAAGTTCTAGACGGAAACTATGATGTCAAGGTTGCATGCCAAATGATCCTGGATAAAATGGGTATGCAAGGCTATCAGATAGGGAAGGCAAAGGTTTTCCTCAGAGCTGGTCAGATGGCTGAACTGGATGCAAGAAGAGCAGAGGTTCTTGGAAATGCTGCTAGAGTCATCCAGAGGCAAATACGTACCCATATTGCACGCAAAGAATTCATTGAATTGCGCCGAGCAGCAATCTGTCTGCAATCTAATTTGCGAGGAATATTGTCCCGGAAACTTTATGAGAAGTTGCGGCGTGAAGCAGCAGCTGTAAAAATGCAGAAGAACTTCAAAGGATACATTGCCAGGAAATCATACTTAAATGCACGATCATCTGCAATTGTGTTACAGACAGGTCTAAGGGCTATGAAAGCTCGTGATGAATTTAGATTTAGAAAGCAAACAAAAGCTGCAATTTATGTGCAGGCTCACTTGCGTCGGTTAATTGCATATTCATACTATAAACAATTGCAAAAGGCTGCAGTTGTTACTCAATGTGGATGGAGGAGAAGGGTTGCTAGAAGGGAACTTAGAATGCTTAAAATGGCTGCAAGAGAAACTGGGGCTCTCCAAGAAGCTAAGGACAAACTTGAAAAGCGTGTTGAAGAACTTACTTGGCGTTTGCAAATTGAGAAGCGTTTGAGAACTGATTTGGAAGAAGAAAAGGCACAAGAAATTGCAAAGTTACAGGATGCTTTACATGCAATGCAAATACAAGTTGAAGAAGCAAATGCCAAGGTCATCAAAGAGCGTGAGGCGGCAAGAAAGGCCATCGAGGAAGCACCTCCAGTTATTAAGGAGACTCCTGTTTTAATTCAAGATACTGAAAAGATTACTTCTTTATTGGCTGAAGTCAGTAGTTTGAAGGAATCACTGCTATTGGAAAAAGAGGCTAAAGAAGAGGCAAGAAAAGCTCAGGTCGAGGCTGAAGCTAGAAATAAAGAGATGGTTAAAAAGGTTGAAGATTCTGACCGCAAAGTGGATCAACTTCAAGAATTGGTTCAGAGATTGGAGGAAAAGATTTCCAATGCAGAGTCAGAAAATCAAGTTCTTCGGCAGCAAGCACTGGCTGTGTCACCAACGGGAAAAGCTCTGTCTGCAAGACCAAGGACAGTTATTATTCAGCGGACACCTGAAAATGGGAGTGCTCTAAATGGTGAAGCGAAAATTGAATCAAATATGCCTCTTGTTGTATCTAACGTGCGTGAGCCTGAATCCGAGGGGAAACCACAAAAATCTCTCAATGAGAAGCAGCAAGAAAACCAAGACTTATTGATCAAGTGCATATCTCAAGATTTGGGATTTTCTGGGGGCAAACCTGTGGCTGCATGTGTCATATATAAATGCCTTCTTCACTGGAGGTCATTTGAAGTTGAAAGGACAAGTGTTTTTGACCGGATCATTCAAACAATAGCTTCAGCTGTTGAGGCCCAGGATAATACGGATGTGTTGTCTTATTGGTTGTCGAATACATCTACTTTGTTGTTGCTACTCCAACGCACTCTTAAAGCTACTGGAGCAGCTAGCTTAACACCGCAGCGGCGGAGAACAGCATCATCTTCTCTTTTTGGAAGAATGTCTCAAGGGCTAAGGGCATCTCCCCAAACTGCTGGATTGTCATTTCTAAATGGTCGAGGTCTTAATAGACTGGACGATTTGCGACAAGTAGAAGCAAAATATCCGGCACTGCTGTTTAAGCAGCAGCTTACTGCCTTCCTTGAAAAAATATATGGAATGATAAGAGACAACCTAAAAAAGGAGATATCTCCATTACTTGGACTGTGTATACAGGCTCCAAGAACCTCACGACAGAGTTTAGTTAAAGGACGCTCACAAGCAAATGCAGTTGCTCAGCAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAAAAGCTTAAACAATTGTCTGAAGATAATGAAAGCAAACTATGCGCCTCCTTTCTTGGTCCGAAAAGTGTTCACTCAGATTTTCTCATTCATCAATGTTCAATTATTCAATAGTCTTCTGTTGCGTCGGGAGTGTTGCTCGTTCAGCAATGGGGAGTATGTAAAAACAGGTCTTGCTGAATTAGAACAGTGGTGCGTTGAGGCAACAGAGGAGTACACTGGGTCTGCTTGGGATGAACTGAAACATATCAGGCAGGCTGTTGGATTCCTGGTGATACATCAAAAACCCAAAAAGTCCCTTAATGAAATTACAAAGGAGCTTTGCCCTGTTCTCAGTATACAACAGTTATACAGGATAAGTACAATGTATTGGGATGACAAATATGGCACTCACAGTGTGTCTTCAGACGTTATAACGAACATGAGAACTATGATGTCCGACGACTCTAATAATGCTGTCAGCACTTCTTTCCTATTAGATGATGACTCGAGCATTCCATTTTCGGTGGATGACATTTCCAAATCAATGCAACAAGTAGAAGTAGCAGATGTGGATCCTCCTCCAATTATACGTGAGAACTCGGGATTTGGGTTCTTACTAGCAAGGTCAGAGTGA 4698 0.4104 MMVGSAIYDQSTFGCIPLLFKNLSAPVNIIVGSHVWIEDPAQAWVDGEVSKINGEEVHVRTTAGKIVVKNISKVLPKDNEAPPGGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSRWVLTATCRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPAEEKEKYKLESPSSFHYLNQSNCYALDGVDDAEEYLATRRAMDVVGISEEEQEAIFRVIAAILHLGNIEFAKGEEIDSSVIKDEKSRFHLNVTAELLKCDCKSLEDALIKRVMVTPEEVITRTLDPIAALGSRDALAKTIYSRLFDCLIIASRLVEKINNSIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADMFLDKNKDYVVAEHQDLLIASKCSFVAGLFPPSPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNYDVKVACQMILDKMGMQGYQIGKAKVFLRAGQMAELDARRAEVLGNAARVIQRQIRTHIARKEFIELRRAAICLQSNLRGILSRKLYEKLRREAAAVKMQKNFKGYIARKSYLNARSSAIVLQTGLRAMKARDEFRFRKQTKAAIYVQAHLRRLIAYSYYKQLQKAAVVTQCGWRRRVARRELRMLKMAARETGALQEAKDKLEKRVEELTWRLQIEKRLRTDLEEEKAQEIAKLQDALHAMQIQVEEANAKVIKEREAARKAIEEAPPVIKETPVLIQDTEKITSLLAEVSSLKESLLLEKEAKEEARKAQVEAEARNKEMVKKVEDSDRKVDQLQELVQRLEEKISNAESENQVLRQQALAVSPTGKALSARPRTVIIQRTPENGSALNGEAKIESNMPLVVSNVREPESEGKPQKSLNEKQQENQDLLIKCISQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSVFDRIIQTIASAVEAQDNTDVLSYWLSNTSTLLLLLQRTLKATGAASLTPQRRRTASSSLFGRMSQGLRASPQTAGLSFLNGRGLNRLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRQSLVKGRSQANAVAQQALIAHWQSIVKSLNNCLKIMKANYAPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCVEATEEYTGSAWDELKHIRQAVGFLVIHQKPKKSLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSSDVITNMRTMMSDDSNNAVSTSFLLDDDSSIPFSVDDISKSMQQVEVADVDPPPIIRENSGFGFLLARSE 1565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01467 1565 ProSiteProfiles IQ motif profile. 772 796 IPR000048 GO:0005515
Vimu7g01467 1565 Gene3D Myosin VI head, motor domain, U50 subdomain 341 636 - -
Vimu7g01467 1565 FunFam unconventional myosin-Va 772 820 - -
Vimu7g01467 1565 Coils Coil 912 992 - -
Vimu7g01467 1565 ProSiteProfiles IQ motif profile. 866 892 IPR000048 GO:0005515
Vimu7g01467 1565 Gene3D - 702 768 - -
Vimu7g01467 1565 FunFam Myosin heavy chain 281 336 - -
Vimu7g01467 1565 SMART iq_5 769 791 IPR000048 GO:0005515
Vimu7g01467 1565 SMART iq_5 888 910 IPR000048 GO:0005515
Vimu7g01467 1565 SMART iq_5 840 862 IPR000048 GO:0005515
Vimu7g01467 1565 SMART iq_5 817 839 IPR000048 GO:0005515
Vimu7g01467 1565 SMART iq_5 865 887 IPR000048 GO:0005515
Vimu7g01467 1565 SMART iq_5 792 814 IPR000048 GO:0005515
Vimu7g01467 1565 Pfam DIL domain 1384 1487 IPR002710 -
Vimu7g01467 1565 CDD MyosinXI_CBD 1148 1531 IPR037975 GO:0007015
Vimu7g01467 1565 FunFam Class V myosin 474 613 - -
Vimu7g01467 1565 Pfam IQ calmodulin-binding motif 794 813 IPR000048 GO:0005515
Vimu7g01467 1565 Pfam IQ calmodulin-binding motif 891 910 IPR000048 GO:0005515
Vimu7g01467 1565 Pfam IQ calmodulin-binding motif 820 838 IPR000048 GO:0005515
Vimu7g01467 1565 Pfam IQ calmodulin-binding motif 772 790 IPR000048 GO:0005515
Vimu7g01467 1565 FunFam Myosin XI D 702 765 - -
Vimu7g01467 1565 ProSiteProfiles IQ motif profile. 818 844 IPR000048 GO:0005515
Vimu7g01467 1565 Pfam Myosin N-terminal SH3-like domain 31 68 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vimu7g01467 1565 Gene3D - 820 867 - -
Vimu7g01467 1565 Gene3D - 868 917 - -
Vimu7g01467 1565 Gene3D - 770 819 - -
Vimu7g01467 1565 ProSiteProfiles IQ motif profile. 793 822 IPR000048 GO:0005515
Vimu7g01467 1565 ProSiteProfiles Dilute domain profile. 1197 1508 IPR002710 -
Vimu7g01467 1565 FunFam unconventional myosin-Va 821 868 - -
Vimu7g01467 1565 ProSiteProfiles IQ motif profile. 841 870 IPR000048 GO:0005515
Vimu7g01467 1565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 820 IPR027417 -
Vimu7g01467 1565 SMART DIL_2 1383 1490 IPR002710 -
Vimu7g01467 1565 SMART MYSc_2a 78 768 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu7g01467 1565 PRINTS Myosin heavy chain signature 517 545 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu7g01467 1565 PRINTS Myosin heavy chain signature 464 492 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu7g01467 1565 PRINTS Myosin heavy chain signature 218 245 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu7g01467 1565 PRINTS Myosin heavy chain signature 114 133 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu7g01467 1565 PRINTS Myosin heavy chain signature 171 196 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu7g01467 1565 Gene3D - 281 339 - -
Vimu7g01467 1565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 821 918 IPR027417 -
Vimu7g01467 1565 Gene3D - 474 658 - -
Vimu7g01467 1565 Pfam Myosin head (motor domain) 86 755 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu7g01467 1565 ProSiteProfiles Myosin motor domain profile. 84 767 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu7g01467 1565 Gene3D Kinesin motor domain 87 697 IPR036961 -
Vimu7g01467 1565 FunFam Myosin 2 341 462 - -
Vimu7g01467 1565 FunFam unconventional myosin-Va 869 916 - -
Vimu7g01467 1565 ProSiteProfiles IQ motif profile. 889 918 IPR000048 GO:0005515
Vimu7g01467 1565 Coils Coil 1020 1086 - -
Vimu7g01467 1565 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 30 79 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vimu7g01467 1565 CDD MYSc_Myo11 98 755 IPR036018 -
Vimu7g01467 1565 PANTHER MYOSIN 80 1496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01467 Vimu-Chr7 13916141 13928921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01467 89 1565 Myosins gene family AT5G20490 82.194 0.0 2503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01467 K10357 - gmx:100777802 2786.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01467 7 13916141 13928921 Vimu7g01467 7 13916141 13928921 ECH