Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01452 ATGAAGAAGTCGTGTGGCTTGAGAGGTTACTGCCTTTGTCTAATCAATATGTTCATGTTGCTTTTGGTAGCAAGGTCCCAACTGACATCAGATTTCTATAGCTCATCATGTCCTAACCTTTCAAAAATAGTAAGAAGAGAGGTCCAAAAAGCTCTCATGAATGAGATGCGAATGGCTGCTTCTTTGCTTCGCCTTCACTTTCATGATTGCTTTGTCAACGGCTGTGATGGATCAATACTACTAGATGGTGGTGATGATGCAGAGAAGTCTGCTATTCCTAATCTGAACTCTGTTAGAGGATATGAGGTTGTAGATACAATCAAAAGTTCAGTGGAGAGTGCATGCAGTGGGGTGGTCTCCTGTGCGGATATATTAGCCATCGCTGCCAGAGATTCTGTGCTCCTAAGTGGTGGACCTTCTTGGAAGGTTTTGCTAGGACGAAGAGATGGCAAGGTGTCAAACGGAACACTGGCAAATAGTGCTCTTCCTGCGCCATTTGATCCATTGGATACCATCATTGCAAAGTTTAATGATGCAGGCCTTAATCTCACAGATGTTGTTTCTTTATCAGGTAAACATAGAACTTCAGCACTCGTAATTGTTTAA 606 0.4257 MKKSCGLRGYCLCLINMFMLLLVARSQLTSDFYSSSCPNLSKIVRREVQKALMNEMRMAASLLRLHFHDCFVNGCDGSILLDGGDDAEKSAIPNLNSVRGYEVVDTIKSSVESACSGVVSCADILAIAARDSVLLSGGPSWKVLLGRRDGKVSNGTLANSALPAPFDPLDTIIAKFNDAGLNLTDVVSLSGKHRTSALVIV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01452 201 ProSiteProfiles Plant heme peroxidase family profile. 27 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 PANTHER PEROXIDASE 72-RELATED 18 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 Pfam Peroxidase 44 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vimu7g01452 201 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01452 201 FunFam Peroxidase 31 167 - -
Vimu7g01452 201 Gene3D - 31 162 - -
Vimu7g01452 201 Gene3D Peroxidase, domain 2 163 194 - -
Vimu7g01452 201 SUPERFAMILY Heme-dependent peroxidases 27 193 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01452 Vimu-Chr7 13813112 13815509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01452 12 193 Peroxidase AT5G19890 64.835 1.01e-80 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01452 K00430 - gmx:100787073 332.028