Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu7g01366 | ATGGAGAGTAAAAAATTGCAGAAGAGCTACTTTGATGTGTTGGGTTTGTGCTGCTCCTCTGAAGTACCACTCATCGAAAACATCTTAAAGCCACTTGAAGGGATCAAAGAGGTTTCTGTCATAGTTCCTTCACGAACTGTCATTGTTCTGCATGACACTCTTGTCATTTCGCAACTTCAAATCGTTAAGGCATTGAATCAAGCGAGATTAGAAGCTAATATCAGAGTACATGGAGATGAAAATCATGGAAAAAGATGGCCAAGCCCTTACTCAATTGCTTCGGGTGTTCTACTTTTGGTTTCTTTTCTGAAATTTGTGTATCCTCCTTTGAGGTATGTAGCAGTTGGTGCAGTTGCTGCTGGTATTTACCCTATCGTCCGAAAGGCCATTGCCTCCATTCGTAATCTTAGGGTTGACATTAGCATTCTCATGATCATAGCAGTTATTGGGACAATTGCTATGGGTGATTATTTGGAAGCTGGCACCATCGTTTTCCTCTTCTCAATTGCAGAATGGTTAGAATCAAGGGCAAGCCACAAGGCAACTGCAGCAATGTCGTCTTTGATGAACATAGCCCCTCAAAAAGCAGTCATAGCTGATACGGGAGAAGTTGTGGATGCGGATGAGGTGAAAGTAAATACCATTTTAGCTGTTAAAGCAGGTGAGGTGATACCCATTGATGGAGTTGTTTTAGATGGAACCTGTGAAGTTGACGAGAAAACTTTGACTGGGGAATCATTCCCTGTGGCAAAACAAAAGGATTCTACTGTATGGGCTGGCACCATCAATTTGAATGGTTATATCAGTGTGAAAACTACTGCACTGGCTGAAGACTGTGTGGTGGCTAAAATGACAAAACTTGTGGAAGAAGCTCAAAACAGCAAAACCAACGTTCAGACATTGATTGACAAGTTTGTCAAGTTTTATACCCCTGCCGTGGTAATCATATCAACCCTTGTAGCAGTGATTCCACTTGCGTTAAAATCACGTAGAGAGAAATACTGGTTTCACTCGGCGTTGGTTGTTTTAGTGAGTGCATGCCCATGTGCACTCATCCTTTCAACTCCAGTTGCAACCTTTTGTGCTTACACCAGAGCAGCCACATCAGGTCTTCTCATCAAAGGGGGTCATCATCTTGAAACACTTGCAAAAATCAAGGTCATGGCCTTTGACAAAACGGGTACCATAACGAAGGGTGATTTTGTGGTCACAGAGTTTCAATCTCTTTCAGATGACATAGATCTCAACACATTGCTTTACTGGGTGTCAAGTGTGGAGAGCAAGTCAAGCCATCCACTGGCATCAGCCATTGTTGATTATGGAAGGTCTCTCTCCGTTGAACCAGAGCCAGAAAAGGTGACAGAATTTGAAAACTTTCCCGGGGAAGGAATTAGTGGAAAAATGGATGACAGAGTTATTTACATAGGAAATAAAAAAATTGCCGCAAGAGCCGGGTCTGAAACAGTTCCAACATTACAAGGAGAAAATGCAAGAGGAAAGACCACTGGATACATATACTTAGGAGCAACCCCAGTTGGATTTTTCTCTCTTTCAGATGTTTGCAGGTTAGGTGTTGAGGAAGCAATTGGGCAGTTGAAGTTAATGGGAATCAAAACAGCCATGCTCACTGGAGACAGTGAATCTGCTGCAATGCAAGCACAGGAGCAGCTGGGACATTCTCTGGAGTTAGTCCATGCAGAACTGTTGCCAGAGGACAAGGTGAAAATCATCTCAGAATTTAAGAAGGAGGGTCCGACAGCCATGATCGGAGATGGTATAAACGATGCGCCGGCATTAGCTTCAGCTGATATCGGAATCTCAATGGGCATTTCAGGTTCTGCACTTGCAAGTGAGACAGGCAATATAATTCTTATGTCAAATGACATTAAGAAGATACCTGAAGCCATTAAGCTTGCAAGAAGAACACGATGGAAAGTGCTTCAGAACATTATTTTGTCAATCACTACCAAGGCTGCGATTATTGGTTTGGCCATTGGTGGTTATCCATATGTTTGGGCAGCAGTGGTTGCTGATGTTGGAACGTGTCTAGTGGTCATCTTGAACAGCATGTTACTTCTTCCAAGAGGCCATAAACATGGAGGAAAATCTTGTAGATCTTCAACTAAGTCTCATATCCACAAAAATGGGTGTGGTGGCACTCATGGCCATGATCATGCTCACCACCAACATCAACATTGTCATGACCAAAACGGGCATGACCACCACAAACATGAACATTGTCATGATCAAAACGGGCATGCTCACCATCAACATCAACATTGTCATGATCAAAACGGGCATGATCACCACCAACATGAACATTGTCATGATCAAAACGGGAACGCACACCACCAACATGAACATTGTCATGATCAAAAGGGGCCTGATCACCACCAACATCAACATTGTCATGATCAAAAGGGGCATGATCACCATCACCATCAACACAAGCATGAGCATGATCACCACCATCTACATCAACATGATCATGAGCATGATCACCATCACCATCAACACAAGCATGAGCTTGATCACCACCATCTACATCAACATGATGATCAAAAGGGTCATGATCACCATCACCATCAACACAAGCAAGAGCATGATCACCATCACCATCAACACAAGCATGAGCATGATCACCACCATCTACATCAACATGATCATGAGCATGATCACCACCAGCATCAACACGAGCATGATCACCATGACCACACCGATAACCATAACAAGTCAGTTTGTCATCCAGACAATGAGAAGAATGGGACAGGTGAAATATCCGTTGACATCATCGCTGAACATGTTGAATCAGCCCCAATGAAGGGTTGTTCAAGTTTGGCAGAAAAAGAGAAAGGTTCCTGCTGTGAAGGCTGCTCAGACACATGCGAGAATTTGGCTGTTGTGTGTGGCTGTGAGAGTTCAAAAGAGGGAGAAGAGAGTGCATGTTGCAGAAATGAATGCTCTTCAAAAGCATGCAACGAGTCTCCAATTATTCATGTTTGTGTTGGTTTGGATAAGAGAGAATATGGTGGATGTTGCAAGAGCTACATGAAGGAATGCTGTGGCAAACTTGGACACTCGAGAACTGGTTTTGTTGGAGGTTTGTCAGAAATTATGACAGAATAG | 3126 | 0.4315 | MESKKLQKSYFDVLGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVLHDTLVISQLQIVKALNQARLEANIRVHGDENHGKRWPSPYSIASGVLLLVSFLKFVYPPLRYVAVGAVAAGIYPIVRKAIASIRNLRVDISILMIIAVIGTIAMGDYLEAGTIVFLFSIAEWLESRASHKATAAMSSLMNIAPQKAVIADTGEVVDADEVKVNTILAVKAGEVIPIDGVVLDGTCEVDEKTLTGESFPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVVAKMTKLVEEAQNSKTNVQTLIDKFVKFYTPAVVIISTLVAVIPLALKSRREKYWFHSALVVLVSACPCALILSTPVATFCAYTRAATSGLLIKGGHHLETLAKIKVMAFDKTGTITKGDFVVTEFQSLSDDIDLNTLLYWVSSVESKSSHPLASAIVDYGRSLSVEPEPEKVTEFENFPGEGISGKMDDRVIYIGNKKIAARAGSETVPTLQGENARGKTTGYIYLGATPVGFFSLSDVCRLGVEEAIGQLKLMGIKTAMLTGDSESAAMQAQEQLGHSLELVHAELLPEDKVKIISEFKKEGPTAMIGDGINDAPALASADIGISMGISGSALASETGNIILMSNDIKKIPEAIKLARRTRWKVLQNIILSITTKAAIIGLAIGGYPYVWAAVVADVGTCLVVILNSMLLLPRGHKHGGKSCRSSTKSHIHKNGCGGTHGHDHAHHQHQHCHDQNGHDHHKHEHCHDQNGHAHHQHQHCHDQNGHDHHQHEHCHDQNGNAHHQHEHCHDQKGPDHHQHQHCHDQKGHDHHHHQHKHEHDHHHLHQHDHEHDHHHHQHKHELDHHHLHQHDDQKGHDHHHHQHKQEHDHHHHQHKHEHDHHHLHQHDHEHDHHQHQHEHDHHDHTDNHNKSVCHPDNEKNGTGEISVDIIAEHVESAPMKGCSSLAEKEKGSCCEGCSDTCENLAVVCGCESSKEGEESACCRNECSSKACNESPIIHVCVGLDKREYGGCCKSYMKECCGKLGHSRTGFVGGLSEIMTE | 1041 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu7g01366 | 1041 | MobiDBLite | consensus disorder prediction | 804 | 844 | - | - | |
| Vimu7g01366 | 1041 | NCBIfam | cadmium family heavy metal-translocating P-type ATPase | 140 | 481 | - | - | |
| Vimu7g01366 | 1041 | ProSiteProfiles | Heavy-metal-associated domain profile. | 7 | 73 | IPR006121 | GO:0046872 | |
| Vimu7g01366 | 1041 | Gene3D | - | 380 | 640 | IPR023214 | - | |
| Vimu7g01366 | 1041 | Gene3D | - | 400 | 521 | IPR023299 | GO:0000166 | |
| Vimu7g01366 | 1041 | Pfam | haloacid dehalogenase-like hydrolase | 385 | 603 | - | - | |
| Vimu7g01366 | 1041 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 141 | 667 | IPR023298 | - | |
| Vimu7g01366 | 1041 | CDD | P-type_ATPase_HM | 92 | 691 | - | - | |
| Vimu7g01366 | 1041 | SFLD | Haloacid Dehalogenase | 372 | 642 | - | - | |
| Vimu7g01366 | 1041 | MobiDBLite | consensus disorder prediction | 698 | 923 | - | - |
Showing 1 to 10 of 38 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu7g01366 | K01534 | - | gmx:100817567 | 1243.8 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vimu7g01366 | 7 | 13043784 | 13052860 | Vimu7g01366 | 7 | 13043784 | 13052860 | ECH |
Showing 1 to 1 of 1 entries