Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01366 ATGGAGAGTAAAAAATTGCAGAAGAGCTACTTTGATGTGTTGGGTTTGTGCTGCTCCTCTGAAGTACCACTCATCGAAAACATCTTAAAGCCACTTGAAGGGATCAAAGAGGTTTCTGTCATAGTTCCTTCACGAACTGTCATTGTTCTGCATGACACTCTTGTCATTTCGCAACTTCAAATCGTTAAGGCATTGAATCAAGCGAGATTAGAAGCTAATATCAGAGTACATGGAGATGAAAATCATGGAAAAAGATGGCCAAGCCCTTACTCAATTGCTTCGGGTGTTCTACTTTTGGTTTCTTTTCTGAAATTTGTGTATCCTCCTTTGAGGTATGTAGCAGTTGGTGCAGTTGCTGCTGGTATTTACCCTATCGTCCGAAAGGCCATTGCCTCCATTCGTAATCTTAGGGTTGACATTAGCATTCTCATGATCATAGCAGTTATTGGGACAATTGCTATGGGTGATTATTTGGAAGCTGGCACCATCGTTTTCCTCTTCTCAATTGCAGAATGGTTAGAATCAAGGGCAAGCCACAAGGCAACTGCAGCAATGTCGTCTTTGATGAACATAGCCCCTCAAAAAGCAGTCATAGCTGATACGGGAGAAGTTGTGGATGCGGATGAGGTGAAAGTAAATACCATTTTAGCTGTTAAAGCAGGTGAGGTGATACCCATTGATGGAGTTGTTTTAGATGGAACCTGTGAAGTTGACGAGAAAACTTTGACTGGGGAATCATTCCCTGTGGCAAAACAAAAGGATTCTACTGTATGGGCTGGCACCATCAATTTGAATGGTTATATCAGTGTGAAAACTACTGCACTGGCTGAAGACTGTGTGGTGGCTAAAATGACAAAACTTGTGGAAGAAGCTCAAAACAGCAAAACCAACGTTCAGACATTGATTGACAAGTTTGTCAAGTTTTATACCCCTGCCGTGGTAATCATATCAACCCTTGTAGCAGTGATTCCACTTGCGTTAAAATCACGTAGAGAGAAATACTGGTTTCACTCGGCGTTGGTTGTTTTAGTGAGTGCATGCCCATGTGCACTCATCCTTTCAACTCCAGTTGCAACCTTTTGTGCTTACACCAGAGCAGCCACATCAGGTCTTCTCATCAAAGGGGGTCATCATCTTGAAACACTTGCAAAAATCAAGGTCATGGCCTTTGACAAAACGGGTACCATAACGAAGGGTGATTTTGTGGTCACAGAGTTTCAATCTCTTTCAGATGACATAGATCTCAACACATTGCTTTACTGGGTGTCAAGTGTGGAGAGCAAGTCAAGCCATCCACTGGCATCAGCCATTGTTGATTATGGAAGGTCTCTCTCCGTTGAACCAGAGCCAGAAAAGGTGACAGAATTTGAAAACTTTCCCGGGGAAGGAATTAGTGGAAAAATGGATGACAGAGTTATTTACATAGGAAATAAAAAAATTGCCGCAAGAGCCGGGTCTGAAACAGTTCCAACATTACAAGGAGAAAATGCAAGAGGAAAGACCACTGGATACATATACTTAGGAGCAACCCCAGTTGGATTTTTCTCTCTTTCAGATGTTTGCAGGTTAGGTGTTGAGGAAGCAATTGGGCAGTTGAAGTTAATGGGAATCAAAACAGCCATGCTCACTGGAGACAGTGAATCTGCTGCAATGCAAGCACAGGAGCAGCTGGGACATTCTCTGGAGTTAGTCCATGCAGAACTGTTGCCAGAGGACAAGGTGAAAATCATCTCAGAATTTAAGAAGGAGGGTCCGACAGCCATGATCGGAGATGGTATAAACGATGCGCCGGCATTAGCTTCAGCTGATATCGGAATCTCAATGGGCATTTCAGGTTCTGCACTTGCAAGTGAGACAGGCAATATAATTCTTATGTCAAATGACATTAAGAAGATACCTGAAGCCATTAAGCTTGCAAGAAGAACACGATGGAAAGTGCTTCAGAACATTATTTTGTCAATCACTACCAAGGCTGCGATTATTGGTTTGGCCATTGGTGGTTATCCATATGTTTGGGCAGCAGTGGTTGCTGATGTTGGAACGTGTCTAGTGGTCATCTTGAACAGCATGTTACTTCTTCCAAGAGGCCATAAACATGGAGGAAAATCTTGTAGATCTTCAACTAAGTCTCATATCCACAAAAATGGGTGTGGTGGCACTCATGGCCATGATCATGCTCACCACCAACATCAACATTGTCATGACCAAAACGGGCATGACCACCACAAACATGAACATTGTCATGATCAAAACGGGCATGCTCACCATCAACATCAACATTGTCATGATCAAAACGGGCATGATCACCACCAACATGAACATTGTCATGATCAAAACGGGAACGCACACCACCAACATGAACATTGTCATGATCAAAAGGGGCCTGATCACCACCAACATCAACATTGTCATGATCAAAAGGGGCATGATCACCATCACCATCAACACAAGCATGAGCATGATCACCACCATCTACATCAACATGATCATGAGCATGATCACCATCACCATCAACACAAGCATGAGCTTGATCACCACCATCTACATCAACATGATGATCAAAAGGGTCATGATCACCATCACCATCAACACAAGCAAGAGCATGATCACCATCACCATCAACACAAGCATGAGCATGATCACCACCATCTACATCAACATGATCATGAGCATGATCACCACCAGCATCAACACGAGCATGATCACCATGACCACACCGATAACCATAACAAGTCAGTTTGTCATCCAGACAATGAGAAGAATGGGACAGGTGAAATATCCGTTGACATCATCGCTGAACATGTTGAATCAGCCCCAATGAAGGGTTGTTCAAGTTTGGCAGAAAAAGAGAAAGGTTCCTGCTGTGAAGGCTGCTCAGACACATGCGAGAATTTGGCTGTTGTGTGTGGCTGTGAGAGTTCAAAAGAGGGAGAAGAGAGTGCATGTTGCAGAAATGAATGCTCTTCAAAAGCATGCAACGAGTCTCCAATTATTCATGTTTGTGTTGGTTTGGATAAGAGAGAATATGGTGGATGTTGCAAGAGCTACATGAAGGAATGCTGTGGCAAACTTGGACACTCGAGAACTGGTTTTGTTGGAGGTTTGTCAGAAATTATGACAGAATAG 3126 0.4315 MESKKLQKSYFDVLGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVLHDTLVISQLQIVKALNQARLEANIRVHGDENHGKRWPSPYSIASGVLLLVSFLKFVYPPLRYVAVGAVAAGIYPIVRKAIASIRNLRVDISILMIIAVIGTIAMGDYLEAGTIVFLFSIAEWLESRASHKATAAMSSLMNIAPQKAVIADTGEVVDADEVKVNTILAVKAGEVIPIDGVVLDGTCEVDEKTLTGESFPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVVAKMTKLVEEAQNSKTNVQTLIDKFVKFYTPAVVIISTLVAVIPLALKSRREKYWFHSALVVLVSACPCALILSTPVATFCAYTRAATSGLLIKGGHHLETLAKIKVMAFDKTGTITKGDFVVTEFQSLSDDIDLNTLLYWVSSVESKSSHPLASAIVDYGRSLSVEPEPEKVTEFENFPGEGISGKMDDRVIYIGNKKIAARAGSETVPTLQGENARGKTTGYIYLGATPVGFFSLSDVCRLGVEEAIGQLKLMGIKTAMLTGDSESAAMQAQEQLGHSLELVHAELLPEDKVKIISEFKKEGPTAMIGDGINDAPALASADIGISMGISGSALASETGNIILMSNDIKKIPEAIKLARRTRWKVLQNIILSITTKAAIIGLAIGGYPYVWAAVVADVGTCLVVILNSMLLLPRGHKHGGKSCRSSTKSHIHKNGCGGTHGHDHAHHQHQHCHDQNGHDHHKHEHCHDQNGHAHHQHQHCHDQNGHDHHQHEHCHDQNGNAHHQHEHCHDQKGPDHHQHQHCHDQKGHDHHHHQHKHEHDHHHLHQHDHEHDHHHHQHKHELDHHHLHQHDDQKGHDHHHHQHKQEHDHHHHQHKHEHDHHHLHQHDHEHDHHQHQHEHDHHDHTDNHNKSVCHPDNEKNGTGEISVDIIAEHVESAPMKGCSSLAEKEKGSCCEGCSDTCENLAVVCGCESSKEGEESACCRNECSSKACNESPIIHVCVGLDKREYGGCCKSYMKECCGKLGHSRTGFVGGLSEIMTE 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01366 1041 MobiDBLite consensus disorder prediction 804 844 - -
Vimu7g01366 1041 NCBIfam cadmium family heavy metal-translocating P-type ATPase 140 481 - -
Vimu7g01366 1041 ProSiteProfiles Heavy-metal-associated domain profile. 7 73 IPR006121 GO:0046872
Vimu7g01366 1041 Gene3D - 380 640 IPR023214 -
Vimu7g01366 1041 Gene3D - 400 521 IPR023299 GO:0000166
Vimu7g01366 1041 Pfam haloacid dehalogenase-like hydrolase 385 603 - -
Vimu7g01366 1041 SUPERFAMILY Calcium ATPase, transmembrane domain M 141 667 IPR023298 -
Vimu7g01366 1041 CDD P-type_ATPase_HM 92 691 - -
Vimu7g01366 1041 SFLD Haloacid Dehalogenase 372 642 - -
Vimu7g01366 1041 MobiDBLite consensus disorder prediction 698 923 - -
Vimu7g01366 1041 FunFam Copper-transporting ATPase 1, putative 178 292 - -
Vimu7g01366 1041 MobiDBLite consensus disorder prediction 717 803 - -
Vimu7g01366 1041 Pfam E1-E2 ATPase 199 367 - -
Vimu7g01366 1041 NCBIfam HAD-IC family P-type ATPase 163 670 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu7g01366 1041 FunFam Putative cadmium/zinc-transporting ATPase 3 3 76 - -
Vimu7g01366 1041 SFLD p-type atpase 372 642 IPR044492 -
Vimu7g01366 1041 MobiDBLite consensus disorder prediction 883 918 - -
Vimu7g01366 1041 MobiDBLite consensus disorder prediction 861 882 - -
Vimu7g01366 1041 SUPERFAMILY HAD-like 388 690 IPR036412 -
Vimu7g01366 1041 Gene3D - 2 76 - -
Vimu7g01366 1041 MobiDBLite consensus disorder prediction 845 860 - -
Vimu7g01366 1041 PRINTS Copper-transporting ATPase signature 180 198 - -
Vimu7g01366 1041 PRINTS Copper-transporting ATPase signature 624 638 - -
Vimu7g01366 1041 PRINTS Copper-transporting ATPase signature 311 325 - -
Vimu7g01366 1041 PRINTS Copper-transporting ATPase signature 567 584 - -
Vimu7g01366 1041 NCBIfam heavy metal translocating P-type ATPase 141 692 IPR027256 GO:0006812|GO:0016020|GO:0019829
Vimu7g01366 1041 FunFam Putative cadmium/zinc-transporting ATPase 3 400 521 - -
Vimu7g01366 1041 SUPERFAMILY HMA, heavy metal-associated domain 4 73 IPR036163 GO:0046872
Vimu7g01366 1041 ProSitePatterns Hypothetical cof family signature 2. 589 611 - -
Vimu7g01366 1041 Gene3D - 177 292 - -
Vimu7g01366 1041 PRINTS P-type cation-transporting ATPase superfamily signature 238 252 - -
Vimu7g01366 1041 PRINTS P-type cation-transporting ATPase superfamily signature 389 403 - -
Vimu7g01366 1041 PRINTS P-type cation-transporting ATPase superfamily signature 589 608 - -
Vimu7g01366 1041 PRINTS P-type cation-transporting ATPase superfamily signature 613 625 - -
Vimu7g01366 1041 PRINTS P-type cation-transporting ATPase superfamily signature 535 545 - -
Vimu7g01366 1041 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 2 693 - -
Vimu7g01366 1041 ProSitePatterns E1-E2 ATPases phosphorylation site. 391 397 IPR018303 -
Vimu7g01366 1041 SUPERFAMILY Calcium ATPase, transduction domain A 202 288 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01366 Vimu-Chr7 13043784 13052860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01366 1 887 Primary Pumps ATPases AT4G30110 55.779 0.0 1037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01366 K01534 - gmx:100817567 1243.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01366 7 13043784 13052860 Vimu7g01366 7 13043784 13052860 ECH