Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01357 ATGCTCGCAAATAGTAACTCAGAAAAGGATCACCCTGATGACATATCTCTAGCTGGGGATGGCTTTGACACAGTGATTAAAGCCAAGGCAGCTGTTGATAGTGACCCCAAGTGCCGGAACAAAGTCTCTTGTGCTGATATCCTCGCTCTGGCTACTAGGGATGTTGTAAATTTGGCAGGGGGACCATTTTACGATGTTGAATTGGGAAGGCGTGATGGTAGAGTATCTACTATTGCAAGTGTTCAACGCCATCTTCCTCACCCTGATTTCAATTTGGATCAGCTCAATTCCATGTTCAACTTCAATGGCCTATCTCAGACAGATATGATTGCATTATCAGGTGCACACACAATTGGGTTCTCTCACTGCAACCGCTTCTCGAAACGAATCTACAACTTCAGCCCCAGAAACAGAATCGACCCGACGCTGGATTTACAATATGCTTTGCAGCTTAGACAGTTGTGCCCCTTAAAGGTTGATCCTAGAATTGCCATAAACATGGACCCTGTGACGCCTCAGAAATTTGACAACCAATACTTCAAGAATCTGCAGAACGGACAGGGTCTCTTCACCTCTGATCAGGTGCTGTTTACAGATGCAAGGTCAAAGGCCACTGTCAACTCGTTTGCATCAGATGAAAAAACTTTTCAGAAAGCTTTTATTGATGCAATTACCAAGTTGGGAAGGGTTGGTGTTAAAACGGGAAATCAAGGTGAAATTAGGTTTGATTGCACCAGGCCAAACTAG 747 0.4431 MLANSNSEKDHPDDISLAGDGFDTVIKAKAAVDSDPKCRNKVSCADILALATRDVVNLAGGPFYDVELGRRDGRVSTIASVQRHLPHPDFNLDQLNSMFNFNGLSQTDMIALSGAHTIGFSHCNRFSKRIYNFSPRNRIDPTLDLQYALQLRQLCPLKVDPRIAINMDPVTPQKFDNQYFKNLQNGQGLFTSDQVLFTDARSKATVNSFASDEKTFQKAFIDAITKLGRVGVKTGNQGEIRFDCTRPN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01357 248 Pfam Peroxidase 5 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 PRINTS Haem peroxidase superfamily signature 168 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 PRINTS Haem peroxidase superfamily signature 60 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 PRINTS Haem peroxidase superfamily signature 108 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 PRINTS Haem peroxidase superfamily signature 42 59 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 ProSiteProfiles Plant heme peroxidase family profile. 1 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 FunFam Peroxidase 86 227 - -
Vimu7g01357 248 Gene3D - 4 248 - -
Vimu7g01357 248 Gene3D Peroxidase, domain 2 86 227 - -
Vimu7g01357 248 ProSitePatterns Peroxidases proximal heme-ligand signature. 108 118 IPR019793 -
Vimu7g01357 248 PRINTS Plant peroxidase signature 182 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 PRINTS Plant peroxidase signature 166 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 PRINTS Plant peroxidase signature 41 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 PRINTS Plant peroxidase signature 107 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 PRINTS Plant peroxidase signature 222 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 PRINTS Plant peroxidase signature 20 33 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 PRINTS Plant peroxidase signature 60 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 SUPERFAMILY Heme-dependent peroxidases 5 248 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu7g01357 248 CDD secretory_peroxidase 3 246 IPR033905 GO:0004601|GO:0042744
Vimu7g01357 248 PANTHER - 4 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01357 Vimu-Chr7 12932096 12933984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01357 1 248 Peroxidase AT2G18980 76.613 2.73e-140 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01357 K00430 - gmx:100804620 466.848