Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01354 ATGGAAGGACAAGTAGCTAAACGCAGACGTGTATACTCTGTACAACCAAACCAAATAGTGCAATCTATATTTACTAGGAATTATTTGAACCATTTGGTTCCAGCTTTGGTGAATATAAAGGAGAATACCTCCGTAGAAGATAGCAGCCATTGTGATATTAACCGTGCTGTCAAGTATGAGGTGGACATGGCAATGGTGTTATCAGCACAAGGTTTTGCATGGAGTAACGGCCTCAAAGTCAAGCTTCGAAACGATCGTGTTCCTGTCAATGCAGCTAAAAGCTCTACGTTTCTTGAAAATGCGGCTGGTGAAGGTTCATCAAGTGCTTGTGACAAAAATGAGGTTGTCCCAATGGAATTCTCTTCAAACCCTAGCTCGAAGCCTAAGGCTGAGGCTTTGGGGAGCAAGTCTAAGTGCAAAGACGTGTCAGAAATGAAAAGGGATTTTGCGAGAGAAGATGATAATGAAAATGGGGACATCGACGAGCAGTGGAAGAGGCTGAGAAGGTTGATACCTGGAGGAGAAGAGATGTGTGATGAACAAATGACTAAAGAGCTTGAGAGTTACATTAGCTGTTTGCAAATGCAGGTGAACGCTCTTCAGTTTCTCCTGCCACAGACGCGTTAA 627 0.4338 MEGQVAKRRRVYSVQPNQIVQSIFTRNYLNHLVPALVNIKENTSVEDSSHCDINRAVKYEVDMAMVLSAQGFAWSNGLKVKLRNDRVPVNAAKSSTFLENAAGEGSSSACDKNEVVPMEFSSNPSSKPKAEALGSKSKCKDVSEMKRDFAREDDNENGDIDEQWKRLRRLIPGGEEMCDEQMTKELESYISCLQMQVNALQFLLPQTR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01354 208 CDD bHLH_AtIBH1_like 151 204 IPR044549 GO:0006355
Vimu7g01354 208 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 203 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01354 Vimu-Chr7 12907056 12908922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01354 1 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 47.059 2.91e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01354 - - gmx:100775329 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01354 7 12907056 12908922 Vimu10g00328 10 2252184 2252768 PCT