Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01345 ATGGTAGCAAAGGATACTAGACGTGTAGATATACTCTGTTATCGTGTCTCCTTAAGCCAGAGACTTTTACAAGGAACTGAAAAGTATGACGAACTTTATAAAATTGTTGATGAAGCAGTGAAGAAACTTGAACCTGAAGTGGGCCCACTCACTGGCTCACCGGTGAAGATTGGTAGGGGAATTGTGAACAGGCTTTCATCAGGACCCGAGGTTCAGAAACAATGTGGTTTTGCTCTTGAATCGCTTGATTCAATGCTTTCGAAAAGGATTTTGCCATCACCACCCAATCCAACAACTCAAGGATACCAAAATTACTTTTGGCCAGATTTGCTTTTTGTGACCCAAAACTATTTCTGGGGTCAGCCGCCAAAACACGAGAATGACCGACTTCAAAGGTTATTCTTTTACATTTTTGTTTCAAAGCACATGAACATGGTATTGGATGCAAATGCTATTCTCGAATACTGTTATAAGATTGATCTGTGTATTCATCAATTTTCAGATGCACATTTGGTGGCTCCAAATATGGTGAGGTTTGAAGATGTCAGTGCCACATCCCTGACTATTATTTTGGGTTCCGATGAACCCTCTGGTGAAAACATCGCTGCTTACACCATGTGGTACCGCAAAGCTGATGAAGTGGACTATCCAATGGAGCCAACATGCACCTCGCTGGTACCAAATAGAAGGTTCAGTGTCAGGGGTCTACTTCCAGGTACAGAATACAGATTCAAAGTTGTTCCAAATGATTCCAGGGTGTCAGGTGTGTGGGAAGTTCAAATCACAACAGAGCTTGGCGAGGATGAAGTCCCTAATTGCTATGCAACAGAGAGAAGTCAGAGCCCAGTAACCAACTGTAGCAGCCTTTCCAATCCGTCATCAGTAGAAGATGAAACTAATAACTGCAATCCATACAGTGACCTGACCAATAACCGAGCAGGTCATTATCCTTCTTTTCGCAAGGAAAGCGACCAGCTTGCTCCTGGAAATTTATCTAATGATGGTGTTAACTGTTCCAACATAGATGTTGTGGGTCTTCCTCCTGATGCAGATTCTTTGTCAGACAAGCAGCATGCTGTAGGAATGACTGCCTCGATACCCAGTTCTGATGTGCTAAAGCTGGAAGACAAGCACTCGCCGGAGGAACAAGTGACTGAGATCATGAGCATTGACGATGGTTTGAATTCCCCAGTTGTAACGGGTAGGGAATGTGTGCCGTGGGTAGGTAGCTCGGAAGGAGGGTTGCCAAATACTCCGTGCAAGTTGGAAAGCCTTAAGGATGGAGCAGGAAGGAGTGGAAGATCGAAGTCGAGTGCGAAAGATCAAGAAAATGGATCAGGGAAAAGGGAGGGACCCCAGGATGGAAGCACATCGAAGAAGAGAAGCGGAGAAAGGCAAGATGAGGGCCGCTTGACCAATGGATTTTCGGAGCGTGATTTTGAGTATTATGTGAAGGTGATTAGGTGGTTAGAGTGTGAAGGGCACATAGAGAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTAAGAGCCACCCCTCAAGAAGTTAGGATTGTGAAAATATACATTGATACATTTCTTGAAGATCCAGCATCTCTTGCAGAGCAACTTGTCGACACCTTCTCAGAATGTATATCCAGCAAGAGAATATCAGTGGTGCCATCCGGGTTCTGCTTGAAGCTTTGGCATTGA 1695 0.4442 MVAKDTRRVDILCYRVSLSQRLLQGTEKYDELYKIVDEAVKKLEPEVGPLTGSPVKIGRGIVNRLSSGPEVQKQCGFALESLDSMLSKRILPSPPNPTTQGYQNYFWPDLLFVTQNYFWGQPPKHENDRLQRLFFYIFVSKHMNMVLDANAILEYCYKIDLCIHQFSDAHLVAPNMVRFEDVSATSLTIILGSDEPSGENIAAYTMWYRKADEVDYPMEPTCTSLVPNRRFSVRGLLPGTEYRFKVVPNDSRVSGVWEVQITTELGEDEVPNCYATERSQSPVTNCSSLSNPSSVEDETNNCNPYSDLTNNRAGHYPSFRKESDQLAPGNLSNDGVNCSNIDVVGLPPDADSLSDKQHAVGMTASIPSSDVLKLEDKHSPEEQVTEIMSIDDGLNSPVVTGRECVPWVGSSEGGLPNTPCKLESLKDGAGRSGRSKSSAKDQENGSGKREGPQDGSTSKKRSGERQDEGRLTNGFSERDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVRIVKIYIDTFLEDPASLAEQLVDTFSECISSKRISVVPSGFCLKLWH 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01345 564 SUPERFAMILY Fibronectin type III 173 260 IPR036116 GO:0005515
Vimu7g01345 564 MobiDBLite consensus disorder prediction 416 471 - -
Vimu7g01345 564 PANTHER VIN3-LIKE PROTEIN 2-RELATED 172 564 IPR044514 GO:0010048|GO:0040029
Vimu7g01345 564 CDD FN3 173 263 IPR003961 GO:0005515
Vimu7g01345 564 Pfam Fibronectin type III domain 173 246 IPR003961 GO:0005515
Vimu7g01345 564 ProSiteProfiles Fibronectin type-III domain profile. 173 268 IPR003961 GO:0005515
Vimu7g01345 564 Gene3D Immunoglobulins 172 267 IPR013783 -
Vimu7g01345 564 MobiDBLite consensus disorder prediction 427 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01345 Vimu-Chr7 12801169 12803150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01345 2 444 PHD Gene Family AT4G30200 35.714 4.74e-64 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01345 7 12801169 12803150 Vimu7g01345 7 12801169 12803150 ECH