Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01344 ATGGGTCTTGCTCTTGATCCTTCCAAGTGCAGTAAATTGAGTATGGAGGAAAAAAGAGAACTTGTATATGAAGTATCTAAGTGGTCTCATGGTGCATCTGAGATGCTGCAGTCATGGAGCCGTCAGGAGATTTTGCAAATATTGTGTGCAGAGATGGGAAAAGAGAGAAAGTATACTGGGTTGACGAAGTTGAAAATTATAGAAAATCTTCTAAAAATTGTTTCTGAAAAGAAATCAGGGGGGCATGAAACTGCGACAGACCCTGAACCACATTCTTCGTCTGCATCTGGTCAGAAACCTGCTAAAAGGCAGAGAAAATCTGAGAATCCTTCTCATTTACCTGTTCCTGTGACCAGCATTTCAGTCAATAATGGTAGTGATTCTGTTCATATTACATACTGCAAGAACTCAGCCTGCAAAGCTACCCTGAATCAAGCAGATGCATTTTGTAAAAGATGTTCATGCTGCATTTGTCATCAATATGATGATAACAAAGACCCTAGCCTGTGGTTAGTATGTAGTTCTGAGAATCCATTTCCCGGTGTTTCATGTGGCTTGTCATGCCACCTTGAGTGTGCTTTGAAACATGATGGTTCTGGAATTGGCAAAGATGGGGATCGTCCCAAGCTTGATGGAGGCTTCTACTGTGTTGCTTGTGGGAAAGTAAATGATTTACTCGGGTAA 684 0.4137 MGLALDPSKCSKLSMEEKRELVYEVSKWSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGHETATDPEPHSSSASGQKPAKRQRKSENPSHLPVPVTSISVNNGSDSVHITYCKNSACKATLNQADAFCKRCSCCICHQYDDNKDPSLWLVCSSENPFPGVSCGLSCHLECALKHDGSGIGKDGDRPKLDGGFYCVACGKVNDLLG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01344 227 PANTHER VIN3-LIKE PROTEIN 2-RELATED 3 227 IPR044514 GO:0010048|GO:0040029
Vimu7g01344 227 Pfam PHD - plant homeodomain finger protein 134 227 IPR032881 -
Vimu7g01344 227 CDD PHD_VIN3_plant 154 219 - -
Vimu7g01344 227 MobiDBLite consensus disorder prediction 78 120 - -
Vimu7g01344 227 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01344 Vimu-Chr7 12797759 12800387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01344 2 226 PHD Gene Family AT4G30200 60.166 3.00e-78 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01344 - - gmx:100819331 444.506