Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01324 ATGGGCTACATTTTGTGCTTCGCTACTGTCACCACCTATTTCTCATTTTTTGCCGCTCAAATTCTGTTACTCGCTTTCTTGGCGGCTTCAGTTGGAAGAGAACGACGAATCACTGCAACTGCAGTCATGGATACTGACGAGGAGTGCTCCATTGTTCTTGAATTACCTGAAACGGATACTTTCTTTGACAAAAAGAAGAAATTACTACAAAGTAAGGGTTTTAGTCCCAAAGAACGGATATGCCTCAGGAACTCTTCAAAACCCGACTGGATAAGTGCTACTGTGGAGGTGTTACTTCAGATTGCTCGGATCATACAATTAAATGAGCTGGAACTTTATTTTGCTGAAGAGTACGTATGCATGTCGATGGAATTTTACAGTCTCAGGAATGAGTTGGAGGCTCTCAATTCAATTGTTTTGCTCACTGACATATCACTTTCTAGTTGTTCACATCTCCATAAAAATATCCTGCAAGGGTTACGCCAAACAATTCTTGATTTAATTACTGATTTGGGGGACAAAAACAGTGTGAAGGGGGGAGTAGTTCAAAAAGACCATAGTTGTGACCAAGAAGAACGGTTGATAGAATGGGGTGAAAGCAATGGCGTAAAGACACAGTTAAAAATAGCTTATATTGAAGGAGCTGGTCGAGGTGCAATAGCAAGGAAAGATCTAAACGTTGGAGACATTGCTTTGGAAATTCCTGTGTCAATTATCATTTCTGAGGAGCTTATTCATGAAACTGAAATGTATGGTGTCTTAAAAGAAATTGACGGCATATCATCAGAGACAATATTGCTATTATGGAGTATGAAAGAAAAGTACAACAGTGATTCAAAATTCAAAATTTATTTTGACACACTCCCAGAAAAGTTTAATACAGGTTTGAGTTTCAGCATTGAAGCAATTAAAGTGTTAGATGGAACCTTGCTGTTGGAAGAGTTAATGCAAGCAAGACAGCACCTGCATGCTCAATATGATGAGTTGTTCCCTGCTCTGTGCAATACTTTTCCTGATATATTTCCACCAGAGCTGTACACATGGGAGAAATTTTTATGGGCTTGTGAACTTTGGTACTCTAATAGCATGAAGATAATATATTCCGATGGAAAGATAAAAACATGCTTGATCCCTATTGCTGGATTTCTCAATCATTCACTGTGCCCGCATGTCATGCACTATGGTCAAGTGGATCCTGCAAAAAATTCACTGAAATTTTGTCTATCAAGACCATGCAAATCTGGAGAGGAATGCTGCTTAAGCTACGGCAACTTCTCCAGCTCTCATCTAATAACCTTTTATGGTTTTTTACCACAAGGAGACAACCCATATGATGTTATTCCGTTAGACATTGACGGTGCCGACGTTGATTCTGATGAGAATATACCCAAGTCCAACTGGACGAGTCACATGGTGCGTGGTACCTGGCTCTCCAGAGATCACAAGATATTCTACTATGGTCTTCCCTCACCATTATTGGACCATCTTCGGAGATCTCGAAGTCCAATGCTGCGAACAAAGACCTTTTTGCAAGAAAACTTGGAAAATGAGCTGGAAGTTCTTGAAAATCTCAAAGGTATCTTCGATGACATGATTAAAAATATGGGCGAAATCGATCTTAATGACAGAGAAAACTGCTGTTGGGATGAAAAATTGGCTATGGATTATAAAAGTACACAAAGACGAATTGCCTGTTCTGTTTCAACCTCGTGTCTCGCTGGGAGAAGGAAGTTGTTTGGCGTAATTGCTGGCTCCACGTGTTTCTTAGTGCTAACTAATGCAAAACCTACCATCCAAAATGCTTAG 1806 0.3987 MGYILCFATVTTYFSFFAAQILLLAFLAASVGRERRITATAVMDTDEECSIVLELPETDTFFDKKKKLLQSKGFSPKERICLRNSSKPDWISATVEVLLQIARIIQLNELELYFAEEYVCMSMEFYSLRNELEALNSIVLLTDISLSSCSHLHKNILQGLRQTILDLITDLGDKNSVKGGVVQKDHSCDQEERLIEWGESNGVKTQLKIAYIEGAGRGAIARKDLNVGDIALEIPVSIIISEELIHETEMYGVLKEIDGISSETILLLWSMKEKYNSDSKFKIYFDTLPEKFNTGLSFSIEAIKVLDGTLLLEELMQARQHLHAQYDELFPALCNTFPDIFPPELYTWEKFLWACELWYSNSMKIIYSDGKIKTCLIPIAGFLNHSLCPHVMHYGQVDPAKNSLKFCLSRPCKSGEECCLSYGNFSSSHLITFYGFLPQGDNPYDVIPLDIDGADVDSDENIPKSNWTSHMVRGTWLSRDHKIFYYGLPSPLLDHLRRSRSPMLRTKTFLQENLENELEVLENLKGIFDDMIKNMGEIDLNDRENCCWDEKLAMDYKSTQRRIACSVSTSCLAGRRKLFGVIAGSTCFLVLTNAKPTIQNA 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01324 601 CDD SET_LSMT 207 437 - -
Vimu7g01324 601 Gene3D - 44 163 IPR036464 -
Vimu7g01324 601 Gene3D set domain protein methyltransferase, domain 1 188 437 - -
Vimu7g01324 601 SUPERFAMILY SET domain 191 444 IPR046341 -
Vimu7g01324 601 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 188 521 - -
Vimu7g01324 601 ProSiteProfiles SET domain profile. 205 423 IPR001214 GO:0005515
Vimu7g01324 601 FunFam Transcription factor, E2F and DP-related 189 437 - -
Vimu7g01324 601 Pfam SET domain 216 423 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vimu7g01324 SET 7.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01324 K19199 - gmx:100778605 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01324 7 12630062 12638938 Vimu7g01324 7 12630062 12638938 ECH