Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01304 ATGCAGAAGCCATCTACCGACGCAATTAGTATGGGCAAAAGGAGCCTGGAGGGTGGAGAAGATGATCAGCCTGAACGAAAGAGGCCTGCTCTCGCCAGTGTAATTGTTGAAGCTCTTAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAGCCTATTCTACGTAGAGTTGTGAGTGAAGAGGTGGAGCGTGCTTTGGCAAAGTTAGGTCCCGCAAGAATTGGTGGAAGGTCTCCACCTAAAATGATTGAAGGCCCTGAAGGTAGAAACTTGCAGCTGCAATTTAAGTCCCGGCTGTCTCTTCCCCTCTTCACGGGAGGAAAAGTAGAAGGCGAGCGGGGGGCTCCAATACATGTTGTTCTGATTGATGCCAACAGTGGAAGCGTTGTAACGTCTGGACCTGAATCCTCTGTTAAGCTTGATGTTGTTGTCCTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACCCAAGAGCATTTTGAAAGCCATGTGGTAAAAGAACGTGAAGGAAAGAGACCTTTATTAACTGGGGACCTGCAAGTAACACTCAAGGAAGGAGTTGGAACATTAGGGGAACTGACCTTTACTGATAACTCAAGTTGGATACGGAGCCGCAAATTCCGCCTTGGCCTGAAGGTTGCCTCAGGCTTTTCTGAGTCCGTACGCATTCGTGAAGCTAAGACAGTGGCTTTTAATGTTAAAGATCATAGAGGAGAATTATATAAGAAGCACTACCCTCCTGCATTGACTGATGAAGTGTGGAGATTGGAGAAGATAGGCAAGGATGGATCATTTCACAAGAAGCTGAATAATGCAGGAATAGTCACAGTTGAAGACTTTCTTCGGCTCGTGGTTAAAGATCAACAGAAATTGCGGAATATCCTTGGAAGTGGTATGTCAAACAAGATGTGGGAGGCTCTTTTAGAGCATGCAAAAACATGTGTTCTAAGTGGGAAGCTCTATGTTTATTATCCAGAAGATGCAAGAAATGTTGGTGTTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATATCTGGAGAACAATTCTTTTCTGCGGATTCTCTCACTGATACCCAGAAGGTTTATGTAGATTCGTTGGTGAAGAAAGCATACGAAAATTGGGAACAGGTTGTAGACTATGATGGCAAATCACTTGTTAATGGCAACCAAAATACCAGTTCTATTACATCTGAAAATGAACTTCGTGTTGAGGCAATTGATTATGGTAGTGGTATAGATCATCAGCTGCAACTGCCGGGACTTCCAGTGTCTGTTCCTTCTGAACATCAAATGAATTCTGGGATGTCAGTTGGGGGTTATAACGATAATGTGGTAACACGATATCCAACCCAGTCATTGATTTCAAACTCAAGCTCCCGGAGTCAGTTCGATAGCTCATTATATCTGTCTAATGACCAATTAATTACCAATACTCACCACACCCCAAACACTAGAAACGATCATGGGACAGTTGGGTTAGCTCTAGGACCTCCTCAATCATCGACGTCAGGGTTCCATGCTGGTAGCTCTTCCATTCAGCCATCTACTCTAAACCCTTTTGATGATTGGTCACACAACAGGGACAAGGGGGTTGATGAATTCTTTTCCGAAGAAGAAATCCGCCTCAGAAGTCACGAAATGTTAGAGAATGAAGATATGCAGCACTTGCTTCGGCTCTTCAGCATGGGAGGCCATGGGTCCATGAGTGCGGAGGATGGCTTTTCATTCCCAACATATATGCCATCTCCCAATATACCAAACTATGATGAGGACCGTTCTCGCCCAGGCAGAGCTGTTGTGGGATGGTTGAAGATCAAGGCAGCAATGAGGTGGGGGTTCTTTATCAGGAAGATAGCAGCTGAGAAGCGGGCACAGATAGAGGAGTTAGATGAATAG 1908 0.445 MQKPSTDAISMGKRSLEGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARIGGRSPPKMIEGPEGRNLQLQFKSRLSLPLFTGGKVEGERGAPIHVVLIDANSGSVVTSGPESSVKLDVVVLEGDFNNEDDEDWTQEHFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFSESVRIREAKTVAFNVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKKLNNAGIVTVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLEHAKTCVLSGKLYVYYPEDARNVGVIFNNIYELRGLISGEQFFSADSLTDTQKVYVDSLVKKAYENWEQVVDYDGKSLVNGNQNTSSITSENELRVEAIDYGSGIDHQLQLPGLPVSVPSEHQMNSGMSVGGYNDNVVTRYPTQSLISNSSSRSQFDSSLYLSNDQLITNTHHTPNTRNDHGTVGLALGPPQSSTSGFHAGSSSIQPSTLNPFDDWSHNRDKGVDEFFSEEEIRLRSHEMLENEDMQHLLRLFSMGGHGSMSAEDGFSFPTYMPSPNIPNYDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01304 635 Coils Coil 623 635 - -
Vimu7g01304 635 Pfam Calmodulin binding protein central domain 252 317 IPR046830 -
Vimu7g01304 635 PANTHER OS02G0177800 PROTEIN 11 557 IPR012416 GO:0005516
Vimu7g01304 635 Pfam Calmodulin binding protein C-terminal domain 322 384 IPR046829 -
Vimu7g01304 635 MobiDBLite consensus disorder prediction 14 28 - -
Vimu7g01304 635 MobiDBLite consensus disorder prediction 1 28 - -
Vimu7g01304 635 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01304 Vimu-Chr7 12471213 12477325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01304 1 630 Calmodulin-binding Proteins AT5G57580 67.395 0.0 847
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01304 7 12471213 12477325 Vimu7g01304 7 12471213 12477325 ECH