Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01295 ATGGGGTTTGAAAAAAAAATTGGCAAGTATCAGCTTGTTAGGACCATTGGAGAAGGTAGCTTCTCTAAGGTTAAGCTGGCTGTCAATGGCACCAATGGTCAGAAGGTTGCGGTCAAGGTCATTGATAAGCATATGATCTTAGAAAACAATCTTAAGACTCAGGCAAAACCTCACCCTAACACTTTCCCTTTATCGAGTAACAGTTTATTTAACTTTCTTAATCAAAGATATCATATGTTTCAGGTTAAAAGAGAGATCAGAACAATGAAACTTCTGCATCATCCCAATATAGTTAGCATTCACGAGGTTATTGGCACAAAAACGAAGATATACATCGTGATGGAATATGTATCAGGAGGACAACTACTAGACAAGTTGTCCTATGGAGAGAAGTTGAATGAACGTGAGGCAAGAAAACTGTTCCAGCAACTCATTGATGCCCTGGACTACTGCCATAACAAAGGGGTCTATCATCGAGATCTCAAGCCAGAAAACCTGCTTCTTGACAGCATGGGAAATCTCAAAGTGTCTGACTTTGGATTAAGTGCATCACAAAAGTGCAATGATGTCTTGACCACGCGGTGTGGATCCCCATGTTATGTAGCACCTGAGCTTCTATTGAGCAAGGGGTATAATGGAGCAGCTGCTGATGTTTGGTCATGTGGGGTGATTCTTTTTGAATTACTTGCAGGCTATTTACCATTTACCGACCAGAACTTGATGAACTTATATGGAAAGATATGGAAGTCAGAATATAAATGTCCCACATGGTTTACTCGGAGTCAAAAGAAACTAATTGCCAAAATACTTGAACCGCGTCCTGCTAAGCGGATAACTATATCAGATATTATTGAAGATCCGTGGTTTCAAGAAGATTACAAGCCTGTTTTTGCATCTGAATTTGATCAGAACATTAACTCGGGGGATGTTGATGTTGCTTTCGATTCAATTGAGGAAAATGTCAGAGAGACAACGGTATCTAAGTCCTCAAGTTTCATTAATGCGTTTCAACTAATAGCCATGTCTCGGGATCTTGATCTATCTGGTCTTTTTGTAGAACAGGATGAAAAAAAGCAGACGAAAAGGATGGGATCCAAACACACTATCAATGAAACGATAGAAAAAATAGAAGCTGCTGCAACAGATGCAAGACTGTCAGTAGAGAAAATTAGCAACTTTAAGATAAAAATGCAACCGAAACAGACAATGGCCATGACCAGTTTCAGATCATACTTATCAGCTCAGGTGATTGAAGTTGCTCCAACTCACTGTGTTGTAGAAATATCAAAATCTACTGAAGATATAAGAACGTATAACAAATTTTGTGAAAGTTTATCAAATCTGCTGAAGCAAAAACCTGGTGTGCCATCACAAAGCGAAGATTCTGTAGATCAATGTGCCTCTGATAGAAAAAAACACGACGCTGAATGCTATGAAGAGCCAAAAAGGGAATATGTCAAACTTTTTCGTGGCTACGAATCTTCTTGA 1488 0.3905 MGFEKKIGKYQLVRTIGEGSFSKVKLAVNGTNGQKVAVKVIDKHMILENNLKTQAKPHPNTFPLSSNSLFNFLNQRYHMFQVKREIRTMKLLHHPNIVSIHEVIGTKTKIYIVMEYVSGGQLLDKLSYGEKLNEREARKLFQQLIDALDYCHNKGVYHRDLKPENLLLDSMGNLKVSDFGLSASQKCNDVLTTRCGSPCYVAPELLLSKGYNGAAADVWSCGVILFELLAGYLPFTDQNLMNLYGKIWKSEYKCPTWFTRSQKKLIAKILEPRPAKRITISDIIEDPWFQEDYKPVFASEFDQNINSGDVDVAFDSIEENVRETTVSKSSSFINAFQLIAMSRDLDLSGLFVEQDEKKQTKRMGSKHTINETIEKIEAAATDARLSVEKISNFKIKMQPKQTMAMTSFRSYLSAQVIEVAPTHCVVEISKSTEDIRTYNKFCESLSNLLKQKPGVPSQSEDSVDQCASDRKKHDAECYEEPKREYVKLFRGYESS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01295 495 MobiDBLite consensus disorder prediction 451 474 - -
Vimu7g01295 495 FunFam Non-specific serine/threonine protein kinase 328 452 - -
Vimu7g01295 495 Pfam Protein kinase domain 81 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g01295 495 SMART serkin_6 10 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g01295 495 CDD CIPK_C 334 451 - -
Vimu7g01295 495 Gene3D Phosphorylase Kinase; domain 1 4 121 - -
Vimu7g01295 495 SUPERFAMILY Protein kinase-like (PK-like) 7 314 IPR011009 -
Vimu7g01295 495 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 444 - -
Vimu7g01295 495 ProSiteProfiles NAF domain profile. 328 352 IPR018451 GO:0007165
Vimu7g01295 495 Gene3D Kinase associated domain 1, KA1 328 451 - -
Vimu7g01295 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Vimu7g01295 495 FunFam Non-specific serine/threonine protein kinase 117 296 - -
Vimu7g01295 495 ProSiteProfiles Protein kinase domain profile. 10 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g01295 495 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Vimu7g01295 495 Pfam NAF domain 331 389 IPR004041 GO:0007165
Vimu7g01295 495 Gene3D Transferase(Phosphotransferase) domain 1 122 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01295 Vimu-Chr7 12405719 12409521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01295 114 449 CBL-interacting serine-threonine protein kinases AT5G57630 60.355 1.45e-139 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vimu7g01295 Pkinase 1.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01295 - - vun:114177464 856.67