Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01262 ATGCGAAATATCAACACCGTGAAGCAAGAATTCCTCAAAAACTGGATATGGGGTCTCAGAAAATATACCTCTCAAAAGAAGAACATGAGTCTGTTGGAGAGAAAGAAAGCCATAAAGCTGTCAGCAGATTTGGCCATGGCTTCCACCAGAAACAAAACCACTCGCTGGAGCAAGGCCCTCATAGCCAATGCTTCCAAAAATAGCAACAACAAAGTCCTCACGGAACACGTGCTAGGCTCATCACCACCGGTAAGGAAAAGCTCCACCAATTATTCCCAAAGCACAAGGATGAGAAGCTGCAGAAACAGGTTGAGAAGAAACCGCGCAGTCCACAGACCAAAGGATAGGGTGGTGGCGAGTTTCATTGCGAGAAAGCTGGTCCAGAAGAGAACGCGGAGGCTGAAGAGTCTCTTACCAGGAGGAGAATTCATGGACGATGTGTCTCTGGTGGAGGAAACCCTAGATTATGTACAATCACTGCGAGCTCAAGTTGAAGTAATGAGATGCCTCGTCACTGCCTCAGAGCTCATGATCCTAAATCCATCGTAA 549 0.4699 MRNINTVKQEFLKNWIWGLRKYTSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSKALIANASKNSNNKVLTEHVLGSSPPVRKSSTNYSQSTRMRSCRNRLRRNRAVHRPKDRVVASFIARKLVQKRTRRLKSLLPGGEFMDDVSLVEETLDYVQSLRAQVEVMRCLVTASELMILNPS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01262 182 CDD bHLH_AtIBH1_like 127 171 IPR044549 GO:0006355
Vimu7g01262 182 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 172 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01262 1 178 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 39.560 1.43e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01262 - - pvu:PHAVU_003G151300g 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01262 7 12041410 12043074 Vimu7g01262 7 12041410 12043074 ECH