Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01214 ATGCAGCAGAGTGATCAGACGGTGTTGAGCTTGAGGCCCGGCGGTGGAAAAGGCAGCAGGCTCCTCGGCCCTCGATTCGACTCATCCTCCTCGTCTTCTGCTTCCCCTGCCTTTGGCTCCTTTTCTGCTGATCTTCCTCTCCTGCGTCCTCATGGCGGCTCTCCCTCTCCCTTCTCTATCAAGGCTGGAGATTCCCGGTTTGAAGGTCGTGAGCGTGTGCGATATACCAGGGAGCAGCTCTTACAACTCAGAGAGGGTGTTGAGATCCATGATGATGTTTTGAAGATCAGACAAGAAATTGTAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGCCCGCCCAGAAAGTAATCCCTCACATCAATTTCAAAATCGATATTCTGAGCCAGATAATCGTGACTGGCGTGGACGATCTGGCCAACCTTTTGGTAATGCAGATGAGAGGTCTTGGGATAATCTTAAGGAGAATAGGGAGTTTGGAAACAATCGTCAAGAGCAACTGAATTCTCAGTTTTCAAGGGCACAAATAACTTCTAACCAAGGGGGTGGACCTACTCCAACACTAGTCAAGGCTGAGGTGCCATGGTCAGCCAGAAGGGGAACTCTCTCTGAAAAAGATCGTGTCTTAAAGACAGTTAAAGGAATACTAAATAAGTTGACTCCCGAGAAATTTGATCTCTTGAAGGGTCAGTTGATTGATTCTGGCATTACATCCGCTGACATATTGAAGGGAGTTATTTCACTAATATTTGATAAGGCAGTGCTAGAACCAACATTTTGCCCAATGTATGCCCAGCTATGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGATGAGCCTGGTGGGAAGGAAATCACTTTTAAGAGAGTGCTCTTGAATAACTGCCAGGAGGCTTTTGAAGGTGCAGATAATCTGAGGGAAGAAGTGAGACAGATGACAGCTCCTGAGCAGGAGATGGAGCGAAGGGATAAGGACAGACTTGTCAAGATTCGAACCCTTGGAAACATTCGTTTAATTGGTGAGCTATTGAAGCAAAAAATGGTTCCCGAAAAGATTGTTCATCACATTGTTCAGGAGCTTTTAGGTCCACCTGACAGCAAGGTCTGTCCAGCTGAGGAAAATGTTGAAGCAATATGTCAATTTTTCAACACTATTGGTAAGCAGCTTGATGAAAGCCAAAAATCGAGGCGTATTAATGATATGTACTTCAGTCGTTTGAAAGAATTGAGCACCAATCCCCAACTTGTTCCACGGCTGCGGTTTATGGTTCGTGATGTTCTAGATTTGCGTTCTAATAACTGGGTTCCTAGACGTGAAGAGGTGAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAGAAAAATCTTGGATTGCGTCCAGGTGCCACTGCAAGTATGAGAAATAGCCGTGTAACTTCTGGTGTTCAAGGAAATGTAAGTCAGGGAGGATTTCCAATTGCCCGACCTGGTACTGGCGGTATGATGCCTGGGATGCCGGGGACAAGGAGGATCCCTGGAATTGATAATGACAACTGGGAGGTTCCCAGGACAAGATCAATGCCGAGAGGAGACATGTCAGGCGTGCAAGCTGGAGGACGTGGTCAGTCTCCTTTCATTTCTAAGACGCCAACTGTTAGCTCAAGGTTACTACCTCAAGGTAGTGGTGGTACTATAAGTGGGAGAAGCAGTGCCCTGGTGCATGGAGGTGGTGGTGCTCCTTCTGCTCGTCCATCAAATGTTGGTTTGAGTACCGAGCCCACACCCCAAATGCCATCACCTGTTAAAGCTGTTTCTGCCATACCCTCTGAGAAGCCACAAGCTTCAGCTCCAAAATTGAATGTTGACGAACTTCAGCGTAAAACTAGTTCTCTTCTGGAAGAATATTTCAGTGTCCGGCTTTTGGACGAGGCATTGCAGTGTGTGGAGGAACTAAAAGCTCCTGCTTATCATCCCGAGGTTGTGAAGGAAGCCATTTCCATTGGACTAGATAAAAGTCCGCCATGTGTTGAACCTGTTGGCAAACTTCTTGAGTATCTGTTCGTGAAGAAGATTCTTTCAGCCAGAGACATAGGGACTGGGTGCATGTTATTTGCTTCTCTGCTGGATGATATCGGCATAGACTTACCTAAAGCACCAAATAATTTTGGTGAGATAGTAGGGAAACTAGTTTTGGCTGGGGCTTTGGATTTTAAGGTGGTGAGAGACGTCCTGAAGAAGGTGGAGGATGACCGGTTCCAGAAAGCAATATTTTCTGCTGCATTGCAGGTAATTAGCTCTGCATCTGGGCAAGCTGTGTTGGATTCGCAAGCATCTGATATTGAGGCCTGTCAGAGTCTGTTCAACTGA 2355 0.4624 MQQSDQTVLSLRPGGGKGSRLLGPRFDSSSSSSASPAFGSFSADLPLLRPHGGSPSPFSIKAGDSRFEGRERVRYTREQLLQLREGVEIHDDVLKIRQEIVAELFGEDQSWARPESNPSHQFQNRYSEPDNRDWRGRSGQPFGNADERSWDNLKENREFGNNRQEQLNSQFSRAQITSNQGGGPTPTLVKAEVPWSARRGTLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGADNLREEVRQMTAPEQEMERRDKDRLVKIRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKVCPAEENVEAICQFFNTIGKQLDESQKSRRINDMYFSRLKELSTNPQLVPRLRFMVRDVLDLRSNNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNSRVTSGVQGNVSQGGFPIARPGTGGMMPGMPGTRRIPGIDNDNWEVPRTRSMPRGDMSGVQAGGRGQSPFISKTPTVSSRLLPQGSGGTISGRSSALVHGGGGAPSARPSNVGLSTEPTPQMPSPVKAVSAIPSEKPQASAPKLNVDELQRKTSSLLEEYFSVRLLDEALQCVEELKAPAYHPEVVKEAISIGLDKSPPCVEPVGKLLEYLFVKKILSARDIGTGCMLFASLLDDIGIDLPKAPNNFGEIVGKLVLAGALDFKVVRDVLKKVEDDRFQKAIFSAALQVISSASGQAVLDSQASDIEACQSLFN 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01214 784 FunFam Eukaryotic translation initiation factor isoform 4G-2 613 774 - -
Vimu7g01214 784 MobiDBLite consensus disorder prediction 111 148 - -
Vimu7g01214 784 MobiDBLite consensus disorder prediction 580 594 - -
Vimu7g01214 784 MobiDBLite consensus disorder prediction 505 598 - -
Vimu7g01214 784 SUPERFAMILY ARM repeat 613 771 IPR016024 -
Vimu7g01214 784 MobiDBLite consensus disorder prediction 24 39 - -
Vimu7g01214 784 SMART if4_15 209 435 IPR003890 GO:0003723|GO:0005515
Vimu7g01214 784 Pfam MA3 domain 620 732 IPR003891 -
Vimu7g01214 784 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 59 768 IPR045208 GO:0003743
Vimu7g01214 784 Pfam MIF4G domain 209 435 IPR003890 GO:0003723|GO:0005515
Vimu7g01214 784 MobiDBLite consensus disorder prediction 1 63 - -
Vimu7g01214 784 FunFam Eukaryotic translation initiation factor isoform 4G-2 200 436 - -
Vimu7g01214 784 Gene3D - 612 779 - -
Vimu7g01214 784 SUPERFAMILY ARM repeat 202 438 IPR016024 -
Vimu7g01214 784 SMART ma3_7 620 732 IPR003891 -
Vimu7g01214 784 Gene3D - 200 436 - -
Vimu7g01214 784 ProSiteProfiles MI domain profile. 619 741 IPR003891 -
Vimu7g01214 784 MobiDBLite consensus disorder prediction 536 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01214 Vimu-Chr7 11611412 11616855 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01214 1 782 Eukaryotic Initiation Factors Gene Family AT5G57870 66.499 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01214 K03260 - gmx:100781275 1372.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01214 7 11611412 11616855 Vimu7g01214 7 11611412 11616855 ECH