Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01207 ATGATGGCAATCCAAAGGAAGGTTCATACCTTCTTCCTGTGCTTGATATCAATCTTTGTATTTTCTTCCCTTGTTGCTGCTGCTGTGCCAAAAGAGCAAGAACAAGATCGGATCTCAGCACTTCCAGGGCAGCCACGTGTGGCATTCTCTCAGTTCTCAGGGCCTGGATGCTCATCGGTAGCATACGGTGCATCAGAGGAAATTGGGCCATTCCGTGTAAACAAAACTGGATCTTCTCTATATCTCAACCCAGATGCATGGAACAGAGAAGCAAATATTCTTTTTCTTGAATCTCCTGCGGGTGTTGGCTTCTCATACACAAATACCAGCTCTGATCTCAAAACTTCAGGGGACAAAAGAACAGCTCAGGATGCACTGATTTTCCTAATCAGATGGATGTCAAGGTTTCCACAGTATAAATATAGGGAGTTTTACATTGCTGGGGAGAGCTATGCAGGGCACTACGTCCCCCAGTTGGCTAAGAAAATCCATGACTATAACAAAAAGAATCCCCAAATTATTAATCTCAAAGGGTTCATTGTGGGAAATGCTGTGACTGATAGCTACAATGATGGGATTGGAACCATCACATATTGGTGGAGTCATTCTATGATATCTAATCAGTCCTACAAATCCATCCTCAAGTACTGCAATTTCACTTCAGAAGAAACCTCTAAAAAATGTGATGATGCTTATAGTTATGCAGTTAACTATGAATTTGGAAAAATAGATCAGTACAGCATCTATACCCCAACGTGCCCAACATCACAGAACAATACTGTCAAACACATACGATTCAAGAATCTTCATATGATTTCAGGATATGATCCGTGTACTGAAAATTATGCAGAGAAATACTATAACCTTCCAGAAGTGCAGAAAGCAATGCATGCAAATGTTACCGACATTCCTTACAAATGGACTGCTTGCAGTGAAGTGCTCCTGAAGAATTGGAAGGATTCTGAAATTTCTGTGCTGCCTATATACAAAGAGTTAACTGCTGCAGGATTGAAAGTATGGGTATTCAGCGGGGACACAGATTCTGTGGTTCCAGTGACTGCCACGAGGTTTTCTCTGAACCACCTTAACCTAAGCATCAAAACTCGTTGGTATCCATGGTACTCTGGTGGACAGGTTGGTGGATGGACAGAAGTGTATAATGGTCTAACATTTGCAACAGTAAGAGGAGCTGGCCATGAAGTTCCTTTGTTTCAGCCAAAACGAGCTTACACCCTTTTTAAGTCCTTTTTGGCAGGAAAAGAACTACCAAAACGTTGA 1278 0.4178 MMAIQRKVHTFFLCLISIFVFSSLVAAAVPKEQEQDRISALPGQPRVAFSQFSGPGCSSVAYGASEEIGPFRVNKTGSSLYLNPDAWNREANILFLESPAGVGFSYTNTSSDLKTSGDKRTAQDALIFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIHDYNKKNPQIINLKGFIVGNAVTDSYNDGIGTITYWWSHSMISNQSYKSILKYCNFTSEETSKKCDDAYSYAVNYEFGKIDQYSIYTPTCPTSQNNTVKHIRFKNLHMISGYDPCTENYAEKYYNLPEVQKAMHANVTDIPYKWTACSEVLLKNWKDSEISVLPIYKELTAAGLKVWVFSGDTDSVVPVTATRFSLNHLNLSIKTRWYPWYSGGQVGGWTEVYNGLTFATVRGAGHEVPLFQPKRAYTLFKSFLAGKELPKR 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01207 425 FunFam Carboxypeptidase 93 255 - -
Vimu7g01207 425 Pfam Serine carboxypeptidase 54 418 IPR001563 GO:0004185|GO:0006508
Vimu7g01207 425 ProSitePatterns Serine carboxypeptidases, histidine active site. 389 406 IPR033124 GO:0004185
Vimu7g01207 425 FunFam Carboxypeptidase 325 419 - -
Vimu7g01207 425 Gene3D - 325 419 - -
Vimu7g01207 425 ProSitePatterns Serine carboxypeptidases, serine active site. 146 153 IPR018202 GO:0004185
Vimu7g01207 425 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 54 406 IPR001563 GO:0004185|GO:0006508
Vimu7g01207 425 FunFam Carboxypeptidase 274 422 - -
Vimu7g01207 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 96 106 IPR001563 GO:0004185|GO:0006508
Vimu7g01207 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 83 95 IPR001563 GO:0004185|GO:0006508
Vimu7g01207 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 157 IPR001563 GO:0004185|GO:0006508
Vimu7g01207 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 389 402 IPR001563 GO:0004185|GO:0006508
Vimu7g01207 425 SUPERFAMILY alpha/beta-Hydrolases 54 422 IPR029058 -
Vimu7g01207 425 Gene3D - 278 315 - -
Vimu7g01207 425 Gene3D alpha/beta hydrolase 32 255 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01207 Vimu-Chr7 11572854 11578902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01207 283 422 Calmodulin-binding Proteins AT2G22960 29.787 2.30e-15 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01207 7 11572854 11578902 Vimu7g01207 7 11572854 11578902 ECH