Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01205 ATGGCTTCATCATCTCCATTTTTGGTGATGCTCTCAATGTGTTTGTTAATTTGCTGCTCTGAAGCCAAACAGTATGTGGTTGGAGGCACTGAAAATTCCTGGAAGACTCCTCTCTCCTCACCAGATTCTCTCAACCATTGGGCCAACTCTCACCATTTCAAAATCGGCGATACTCTCGGTATTCTTCATAACTCTCTCCATTATTTTTCTTATATGCATCAATGTCTCAGCAGCTTTTTATATGCATTTTACGTAGTATTTAAATACGACGAGAGAACTGAGTCAGTGCATGAAGTGAAGAAGACAGACTACGAAAGGTGCAATACGGTGGGGCAAGAACATGTGGTGTATAACGATGGTAACACCAAGGTCTTGCTTGCAAAATCTGGATTCAGACATTTCATAAGTGGAAATCAGAGTCACTGCCGCATGGGCTTAAAACTCACAGTGGTTGTCGTCACTGCCAAAACTAAAAACAACCCTACTTCTCCAACTCCTTCTCCTTCACCATCACCTTCACCTTCACCTTCACCTTCACCTTCACCTTCACCATTGCCGCCGTCGCCATCGCCATCGCCTTCACCACTTCCAAAAAATCACGGTGTTAATGGTCGTTCAAGCGGTGGATTCATTATAATGTGGTTGTTGGGGTTGATGATGTTACTGGTTTAA 672 0.4345 MASSSPFLVMLSMCLLICCSEAKQYVVGGTENSWKTPLSSPDSLNHWANSHHFKIGDTLGILHNSLHYFSYMHQCLSSFLYAFYVVFKYDERTESVHEVKKTDYERCNTVGQEHVVYNDGNTKVLLAKSGFRHFISGNQSHCRMGLKLTVVVVTAKTKNNPTSPTPSPSPSPSPSPSPSPSPSPLPPSPSPSPSPLPKNHGVNGRSSGGFIIMWLLGLMMLLV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01205 223 Gene3D - 20 156 IPR008972 -
Vimu7g01205 223 MobiDBLite consensus disorder prediction 163 196 - -
Vimu7g01205 223 ProSiteProfiles Phytocyanin domain profile. 23 154 IPR003245 GO:0009055
Vimu7g01205 223 Pfam Plastocyanin-like domain 85 145 IPR003245 GO:0009055
Vimu7g01205 223 PANTHER BLUE COPPER PROTEIN 23 162 IPR039391 GO:0009055
Vimu7g01205 223 MobiDBLite consensus disorder prediction 157 202 - -
Vimu7g01205 223 SUPERFAMILY Cupredoxins 22 153 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01205 Vimu-Chr7 11557423 11558094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01205 1 185 Phytocyanin Superfamily AT4G31840 35.638 2.40e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01205 - - gmx:547770 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01205 7 11557423 11558094 Vimu7g01205 7 11557423 11558094 ECH