Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01197 TTCTTGTTTCTTGCCAAGGAAAAGAGGCACCTGAGTCAATGCAGGTCAGAGACACGAACCCACACACCATCTCCCCCGCAAACACTCTCTCACACTAACAGTGGCGTTTCTCGAAACCCGAAACGTCTCGCTTTTCAACACCATAAAACCAGCAACCGCTTCAAACTTCACTCTCTCTCAATCCTCCCCTACTGTGCCATGGCTGAACGCTGCAGCCCCCAAGCTCTCCCAGACCCGAACCTGGAACCAAATGATTCCGACCAAAAACCGCACAACGCCAACCAGACACAACGACTCACTGAATCGCCCTCCGCTGCCATGTCGCAGCGGGGCGAGTTACGAAGTTCCGGTGAGCGTAGTACGGAGTTCAATTTAGAAACCCTAGGTGGTGCCGCTACCTCTTCCTCTTCGGTGCAAACCCTTGCTGTGCATCACCATCGCAGTGACGATTTGCACGGGAACTCTGCTGCGTCGAATTCCAGTGGCAAAGCCGAAAGTAAGGTTCTGAGTGTTGTTTTGTGCGATCATTTTCTTGTAGTTGTGCTTGTGGTTAGGGATTTGATATGTAGTGCAAGTGTAACCCGTTTGAAGAGTTTTGCTCAGTTGCAATTTTTACTGGTTGCTACTTATAGGTTAACTGGATCTTTGGATATTGAGACAGATGCACCTCCTGAAAAAGAAATTATTCAAGGAGAAGCCCAGCCACTTCCAACTCAGACAAATCAACTTCAACTGACTGTTTGTTCAACTCCATTGTCTGAACTGCCACCAACTTCTGTTATACAATCTTCACCATCTGTTTCTAGTCCATTTGTACCAAAACAAAAATTATCTACTCCAAAGGTCAATAATGCACGTTTGCCAGAAGTAGATAAGAAAAGTTCTTCTGGTGGCAAAACATTATCTGCTGTTTCTGTTGCAAGGTCATCTGCATCTGATGGATATAACTGGCGGAAGTATGGTCAGAAGCAAGTAAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACCCATTCAGACTGTTGTGCTAAGAAGATTGAATGTTGTGATCATTCAGGTCATGTGATAGAGATTGTTTATAAAAGTGAGCACAGTCATGATCCCCCACGGAAGATTAATTCTCTTAGGGAAAATAAGATTCTGTCTGCCAGCGAACCAATTGTAGAAAAGAGTGTTCCAGACCAGCCTGTCAGACTTCTGAAGGATCCTGATCCATCCATTTCCTCAAAAGAATCTCTACAAGAAGCACTTTGCAGCACTGATAAGAAACGGCCAAACTCGTCTAGTATCAGTAATGGTAAAGTTATTTTGAAAGAGGAACCTGTAAATGAGCCAGAGCCGAAAAAAAGAATGAAGAAAGGTGACTTAACAGACATGGATTCTCCTGTAAAACATGGCAAGAAGCCCAAGTTTGTTATACATGCAGCAGGGGATGTGGGGATATCTGGTGATGGTTATCGATGGCGGAAGTATGGGCAGAAAATGGTGAAGGGAAATCCGCATCCCAGGTGCATGTCTAAATATTGCTTACTTTCTGTTTTCTTTTCCTTTTAA 1557 0.4451 FLFLAKEKRHLSQCRSETRTHTPSPPQTLSHTNSGVSRNPKRLAFQHHKTSNRFKLHSLSILPYCAMAERCSPQALPDPNLEPNDSDQKPHNANQTQRLTESPSAAMSQRGELRSSGERSTEFNLETLGGAATSSSSVQTLAVHHHRSDDLHGNSAASNSSGKAESKVLSVVLCDHFLVVVLVVRDLICSASVTRLKSFAQLQFLLVATYRLTGSLDIETDAPPEKEIIQGEAQPLPTQTNQLQLTVCSTPLSELPPTSVIQSSPSVSSPFVPKQKLSTPKVNNARLPEVDKKSSSGGKTLSAVSVARSSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCDHSGHVIEIVYKSEHSHDPPRKINSLRENKILSASEPIVEKSVPDQPVRLLKDPDPSISSKESLQEALCSTDKKRPNSSSISNGKVILKEEPVNEPEPKKRMKKGDLTDMDSPVKHGKKPKFVIHAAGDVGISGDGYRWRKYGQKMVKGNPHPRCMSKYCLLSVFFSF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01197 518 MobiDBLite consensus disorder prediction 387 467 - -
Vimu7g01197 518 MobiDBLite consensus disorder prediction 86 120 - -
Vimu7g01197 518 MobiDBLite consensus disorder prediction 136 161 - -
Vimu7g01197 518 ProSiteProfiles WRKY domain profile. 306 370 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu7g01197 518 MobiDBLite consensus disorder prediction 408 435 - -
Vimu7g01197 518 SMART WRKY_cls 311 369 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu7g01197 518 SMART WRKY_cls 483 518 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu7g01197 518 MobiDBLite consensus disorder prediction 440 467 - -
Vimu7g01197 518 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 264 504 IPR044810 GO:0003700
Vimu7g01197 518 SUPERFAMILY WRKY DNA-binding domain 479 511 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vimu7g01197 518 Gene3D WRKY domain 471 512 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vimu7g01197 518 MobiDBLite consensus disorder prediction 259 279 - -
Vimu7g01197 518 SUPERFAMILY WRKY DNA-binding domain 309 370 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vimu7g01197 518 Gene3D WRKY domain 297 371 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vimu7g01197 518 MobiDBLite consensus disorder prediction 9 39 - -
Vimu7g01197 518 ProSiteProfiles WRKY domain profile. 478 508 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu7g01197 518 MobiDBLite consensus disorder prediction 75 120 - -
Vimu7g01197 518 MobiDBLite consensus disorder prediction 17 39 - -
Vimu7g01197 518 Pfam WRKY DNA -binding domain 313 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu7g01197 518 Pfam WRKY DNA -binding domain 485 505 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01197 Vimu-Chr7 11498991 11501964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01197 230 510 WRKY Transcription Factor Family AT4G30935 48.097 1.34e-70 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vimu7g01197 WRKY 2.3e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01197 - - gmx:100127377 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01197 7 11498991 11501964 Vimu7g01197 7 11498991 11501964 ECH