Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu7g01188 | ATGAAACAAAACCTATCATACTATGATGGAGACACGTGCCATGCGGAAAATTTCCGAAAATGGAAAATAACAGTAATTAAACTACCCGCTCTGCCGAATGAGAAATTGTGGTTCTCGAATCCATCGCGTGGGATAAGGGTAGTGAAGCCTGAATCTGAAGCTTCGCGGACGTTGGCTATGCTCCGCAAATTGTTCTTCCGCAAGCCTCCAGATGGCCTCCTCGAGATCTGCGAGAGAGTTCACGTTTTCGATTGCTGCTTCACCACGGATACATGGAAAGAAGGGAATTACAATTACAAAGAATACATGGACGGGATAGTTGGTCAACTTAAGGAGAACTCGCTTGATGCTTCGATTCTTATTTTCAATTTTCGCGAGGAAGGTACCGAGAGTCAGATGGCAAGTATCATGTCTGAGCATGACATTACTATCATGGACTATCCTTTGCACTACCAAGGTGTTCCCGTGCTAAAAATGGAGCTCATCCACCATTTTCTGAGGTCTAGTGAAAGCTGGCTCTCGCTTGGGCAAAATAATGTGTTGCTGATGCATTGTGAACCTGGTGGTTGGCCTGTTTTGGCTTTCATGTTGGCTGCATTGTTGATTTATAGAAAGGCTTATACTGGGGAGCAGAGGACTCTCGATATCGTTTACAGGCAGGCTCCTCACGAGCTTTTGCATTTGTTGTCACCGTTGAATCCTATCCCTTCCCAACTGAGGTATCTGCTGTATGTTTCCAGGAGGAATGTGGCCTTAGATTGGCCTCCTCTGGACAGGGCACTTATGTTGGACTGCATCATTCTCAGACTCTTCCCAAACTTTGACAGTGAAGGTGGTTGTCATCCCGTGTTTAGAATTTATGGACAAGATCCCTTTGATGCTGATAAAGTTCACAAAATGTTGTACTCAACGCCAAAAAGAAGCAAAAAGGTTGGGGCCTTTAAGCAGGGAGAGTGTGAACTTATTAAAATTGATATCAATTGCCATATTCAAGGTGATGTTGTCATTGAGACTATTAACTTTAATGGTGACATGGAGCGTGAAAGGATGATGTTTCGAATCGTGTTTAACACATCCTTTGTTAGATCTAATATTTTGATGCTTAACCGGGATGAAATTGACATTTTATGGGATGCTAAAGATCACTTTCCAAACGATTTTAGAGTTGAGATCCTTTTCTCAGAGATGGATGCTGCAATAGTTGTTGCCGATAGGACCTCATGCTTTGAGGAGAAGGATGGACTACCAATGGAAGCATTTGCCAAGGTTCAAGAGATCTTTAGCCATGTAGACTGGATGAACCCTAAGGCAGATGTTGCCCTAAATGCTCTCCAACTTATAAGTGATTCAACTATGAATGATAGCTTAGATGAAAAAGATCCTAGAACGCCCCAAGGGAATTTGAATGAAGAGGTACGGTCTTCATTCTCAACCAAGACATCCCCAGTTACAGATATGAGTAGAAAAGAGGACAATACCAACAAGTTCGAGGGTATTCCGCAGCAACCTAGTACACCTAACAATATTTGTCAAGAGTCAACCAGATCTGCTAAAAGGACCTCGGAATCCAATAAATGTCCAACAAGACCTACAAATCTTGAAATAAAACAGCAATCACCTCATCCTGCCGTATCTTCTACCGATACTTCTTTTTCCCCTCGAACACCTCCTTTGAGGCCTCAATCCACTAGTGCTAAAGAAGCTCATGATTCTCCTCACCAAACAGAATCGCCCCCTTCTTATTATGTTGTGCCTTTGCAATCAAAACAGCAATCACAAGACAGAAGTCATTCATCTATTTCTATCCCTACACCTGACACCCAATTGTCATCTACTTTTCATAGCAAGTCACTGGCTGACACCATTTCCTGTCCTTCAGCTTCAACAATTACTTCGACCCAAGCATCTCCTTCACTTTCTTCCAAAAATGTGGATGAGATTCCTCCTATTAAAACAAGAATAGAGTCTACCCCTTCACGACCTCCAACTCCGCCTCCTCCGCCCACTCCTCCACTAAATGATCATAGACGAGTTCGAGCTACACCACCTCCTCCACCACCACCTCCTCCTATTCCTCCAAAAAAAGAACTACATGTTAAAGCTGGACCCCATCCTTCTCCTCTATCACATATGAATGTGGAGCCACAGGTTAGAGATGGACCCTCTCCTCCCCTTTCTCTAAAAGAGGAGCAACCTACTAGGTTTAAACCTCCTTGTCTCTCTGGGCAAGTTGCAGGTTTTACTATAGTACCACCTCCTCCTCCACCTCCACTTTCAAGTGAAGTACTTTACTCAAATTGCACTAATTCATCATTGCAAAAATCTCTAGCTCCTTCCCCTCCTCCCGGGGCACCTGCCCCTCCCCCTCCTCCCGGGGCACCTGCCCCTCCCCCTCCTCCTGGGGTACCTTCCCCTTCCCCTCCCCCTCCTCCCAGGGCACCTGCCCCTCCCCCTCCTCCGAGGGCACCTGCCCCTCCCTCTCCTCCTGGGGCACCTGCTCCTCCCCCTCCTCCTGGGGCACCTGCTCCTCCCCCTCCTCCTGGTGCACCTGCTCCTCCTCCTCCTCCTGGAGCACCTGCTGCTCCACCTCCTCCAATGCCCTTTGGTAAAGGAGGTCTGAAATCAGGCAGTCCTTTTCCAGGATCTCATTCTGTGAACGCTCGATCTAGTTCACCAACTAACTTGAAGGGAGTTTTATCGCGAACAATTAACTCAAAGAATAACACAAAAAGGTTGAAGCCTTTGCATTGGTTGAAACTATCTAGAGCAGTGCAAGGAAGTTTGTGGGCAGAGACACCGAAGTCTGGTGAAGCTTCCAAGGCCCCAGAGATTGATATGTCAGAGCTTGAGAATCTCTTCTCAGCAGCAGTCCCAACTTCAGGTATTGCCAAAAAGTCAAATGTCCAAAGCTCAGCTGGGCCTAAATCTGAAAAAGTGCAACTGATTGAGCATAGGCGAGCATATAACTGTGAAATCATGCTTTCCCAAGTGAAAGTTCCGTTGCACGATTTAATGACCTCAGTACTAACACTGGAAGAGTCAGCACTGGACTCTGATCAGGTTGAGAACCTCATAAAGTTCTGTCCAACAAAAGAGGAAATGGAATTACTCAAGGGTTATAACGGGGAAAGGGAGAAGTTAGGAAGATGTGAACAGTTCTTAATGGAATTGATGAAAGTACCACGAGTGGAATCCAAGCTCAGAGTTTTTTCATTCAAGATTCAATTTCGCTCTCAGGTTTCTGACCTAAGAAAGAGCCTGGTTATTGTGAATGCTGCTTCAGAAGAGGCATGGAATTCGGTCAAACTAAAGAGAATTATGCATACAATACTTTCTTTAGGAAATGCTTTGAACCAAGGAACTGCCAGGGATTTGAAATCAGCAATAGAGGCTGACTGTGTTGATGCAGCTGTGGGATCTTACTGCAGTGTAGTGATAGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTAACCGAGACGCGGGCACGGGACAAAAAGTTGACTCTTATGCATTATCTTTGTAAGGTGCTAGTTGACAAACTGCCGGAAGTCTTAGACTTCTCCAACGATCTTTCTGACCTAGAGCCAGCAGCAAAGATCCAATTGAAGTTTTTGGCTGAGGAGATGCAAGCTATAAACAAAGGATTAGAAAAAGTAATACAGGAACTCTCAACTGCTGAAAGTGATGGGCCTATATCAGAAACTTTCCGCAAGAAACTGAAAGAGTTCCTCGGTTCTGCTGAAGCTGAAGTCCGCTCACTAGCTTCACTATATTCAACCGTGGGTAGGAACGTGGATGCATTGATTCTCTATTTTGGTGAAGATCCATCTCGTTGCCCATTTGAGCAAGTCGCGTCAACTTTGCTCAACTTTACCAGGATGTTCAACAAAGCCCATGAAGAAAACTGCAAGCAGCTAGAACTTGAAATGAAGAAAACTGAAAATGAGAAAAAGAAATGTGAATCAGAAAGGATTTTACCTACACCTATCCCGACTGGCAATGTCAAATAG | 4020 | 0.449 | MKQNLSYYDGDTCHAENFRKWKITVIKLPALPNEKLWFSNPSRGIRVVKPESEASRTLAMLRKLFFRKPPDGLLEICERVHVFDCCFTTDTWKEGNYNYKEYMDGIVGQLKENSLDASILIFNFREEGTESQMASIMSEHDITIMDYPLHYQGVPVLKMELIHHFLRSSESWLSLGQNNVLLMHCEPGGWPVLAFMLAALLIYRKAYTGEQRTLDIVYRQAPHELLHLLSPLNPIPSQLRYLLYVSRRNVALDWPPLDRALMLDCIILRLFPNFDSEGGCHPVFRIYGQDPFDADKVHKMLYSTPKRSKKVGAFKQGECELIKIDINCHIQGDVVIETINFNGDMERERMMFRIVFNTSFVRSNILMLNRDEIDILWDAKDHFPNDFRVEILFSEMDAAIVVADRTSCFEEKDGLPMEAFAKVQEIFSHVDWMNPKADVALNALQLISDSTMNDSLDEKDPRTPQGNLNEEVRSSFSTKTSPVTDMSRKEDNTNKFEGIPQQPSTPNNICQESTRSAKRTSESNKCPTRPTNLEIKQQSPHPAVSSTDTSFSPRTPPLRPQSTSAKEAHDSPHQTESPPSYYVVPLQSKQQSQDRSHSSISIPTPDTQLSSTFHSKSLADTISCPSASTITSTQASPSLSSKNVDEIPPIKTRIESTPSRPPTPPPPPTPPLNDHRRVRATPPPPPPPPPIPPKKELHVKAGPHPSPLSHMNVEPQVRDGPSPPLSLKEEQPTRFKPPCLSGQVAGFTIVPPPPPPPLSSEVLYSNCTNSSLQKSLAPSPPPGAPAPPPPPGAPAPPPPPGVPSPSPPPPPRAPAPPPPPRAPAPPSPPGAPAPPPPPGAPAPPPPPGAPAPPPPPGAPAAPPPPMPFGKGGLKSGSPFPGSHSVNARSSSPTNLKGVLSRTINSKNNTKRLKPLHWLKLSRAVQGSLWAETPKSGEASKAPEIDMSELENLFSAAVPTSGIAKKSNVQSSAGPKSEKVQLIEHRRAYNCEIMLSQVKVPLHDLMTSVLTLEESALDSDQVENLIKFCPTKEEMELLKGYNGEREKLGRCEQFLMELMKVPRVESKLRVFSFKIQFRSQVSDLRKSLVIVNAASEEAWNSVKLKRIMHTILSLGNALNQGTARDLKSAIEADCVDAAVGSYCSVVIGSAIGFRLDSLLKLTETRARDKKLTLMHYLCKVLVDKLPEVLDFSNDLSDLEPAAKIQLKFLAEEMQAINKGLEKVIQELSTAESDGPISETFRKKLKEFLGSAEAEVRSLASLYSTVGRNVDALILYFGEDPSRCPFEQVASTLLNFTRMFNKAHEENCKQLELEMKKTENEKKKCESERILPTPIPTGNVK | 1339 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu7g01188 | 1339 | Gene3D | Formin, FH2 domain | 900 | 1309 | IPR042201 | - | |
| Vimu7g01188 | 1339 | MobiDBLite | consensus disorder prediction | 761 | 777 | - | - | |
| Vimu7g01188 | 1339 | Pfam | C2 domain of PTEN tumour-suppressor protein | 259 | 395 | IPR014020 | - | |
| Vimu7g01188 | 1339 | Gene3D | Protein tyrosine phosphatase superfamily | 70 | 250 | IPR029021 | - | |
| Vimu7g01188 | 1339 | MobiDBLite | consensus disorder prediction | 496 | 614 | - | - | |
| Vimu7g01188 | 1339 | MobiDBLite | consensus disorder prediction | 628 | 645 | - | - | |
| Vimu7g01188 | 1339 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 902 | 1324 | IPR015425 | - | |
| Vimu7g01188 | 1339 | Pfam | Formin Homology 2 Domain | 1147 | 1298 | IPR015425 | - | |
| Vimu7g01188 | 1339 | Pfam | Formin Homology 2 Domain | 906 | 1123 | IPR015425 | - | |
| Vimu7g01188 | 1339 | ProSiteProfiles | C2 tensin-type domain profile. | 258 | 396 | IPR014020 | - |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu7g01188 | - | - | var:108329436 | 1426.77 |
Showing 1 to 1 of 1 entries