Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01140 ATGACTACTGTGTTAAACTACCGATCCATCAACAAAATAATGCCAGAAGATCTTGTACTGGCTGTGACATCAATTTGCATTGGATCAAATTTCCTCCTAGCTCCTTTTTTGCAAGATCTAGTACCACCATTTTCTCTCCTTAATTTTGTGCAAGATCTTCACCCTTGCTTTCTGCGTCAAAACAGCTCTACTTGTAGCATGGTTGGAGACTTGGGTCTGTCCAAAGTAAAATGTCAGACACTGATCTCTGGTGGGGTGAGAGGAACTCTGCCGTGGATGGCTCCAGAATTGCTTAACGGAAGCAGCAGCCTTGTTTCAGAGAAGGTTGACGTATTTTCATTTGGCATTGTGATGTGGGAACTCTTGACCGGATTGGAGCCCTACGCTGACTTGCACTATGGTGCTATTATTGGTGGTATAGTGAGCAACACTTTACGCCCTCCTATTCCAGAACATTGTGATCCAGAATGGACATTGTTGATGGAGAGGTGCTGGTCATCAGAGCCATCAGAGAGACCAAACTTCACTGAGATTGCCAGTGAATTGCGATCTATAGCAGCCAAGATCTCTCCCAAAGCACAGAACTCTCCCAAAGGACAAATCCAACAGCTGCCACACTCTCCAGTGCAAACTCAACTCAACAAATGA 648 0.4491 MTTVLNYRSINKIMPEDLVLAVTSICIGSNFLLAPFLQDLVPPFSLLNFVQDLHPCFLRQNSSTCSMVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGLEPYADLHYGAIIGGIVSNTLRPPIPEHCDPEWTLLMERCWSSEPSERPNFTEIASELRSIAAKISPKAQNSPKGQIQQLPHSPVQTQLNK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01140 215 SUPERFAMILY Protein kinase-like (PK-like) 61 180 IPR011009 -
Vimu7g01140 215 PANTHER SERINE-THREONINE PROTEIN KINASE 61 186 - -
Vimu7g01140 215 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g01140 215 Pfam Protein tyrosine and serine/threonine kinase 64 182 IPR001245 GO:0004672|GO:0006468
Vimu7g01140 215 MobiDBLite consensus disorder prediction 189 215 - -
Vimu7g01140 215 Gene3D Transferase(Phosphotransferase) domain 1 38 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01140 Vimu-Chr7 11083085 11084019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01140 68 199 MAP Kinase Kinase Kinase AT3G46920 81.818 1.83e-71 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Vimu7g01140 PK_Tyr_Ser-Thr 8.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01140 - - gmx:100819234 264.618