Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01126 ATGGGATACCAAAAGCCTGCATGGTTGGAAGCTCTTTACACACAAAAGTTCTTTGTGGGGTGCTCTTACCATGAGAACGCTAAAAAGAATGAGAAGAACGTCTGCTGCTTAGATTGTTGCACCAGTATTTGCCCTCACTGCTTACCATCTCATCGCTTCCACAGACTTCTTCAGGTTCGCCGTTACGTTTACCATGATGTTGTTAGGCTTGAAGATCTTCAGAAACTCATAGATTGCTCCAACGTTCAGGCTTATACCATCAATAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCTCAAAACCGGCAATTCAAAGGATCAGGAAACTACTGTACCTCCTGCGATAGAAGTCTTCAAGAGCCTTTTATTCATTGCTCTCTTGGATGCAAGGTTGATTTTGTGATGAAACACTACAAGGATCTGTCTCCATACTTGAGGACATGCAACTCCCTACAACTAAGTCCTGATTTTCTGATCCCACAAGAGACGGTGGATGAAGAGATGACTCGTTCAACGATTGTGGATTGTGATGAGCCAATGAGTTCGTGTTCAGGGTCATCAGGGTCGGAGAACAACATGAGCATGTCTTGCACAGAGATTGTAAGGAAAAGGAGGAGTGGATGGAGCACTGTGTGTGCAAAATTCATGGCCAACAGCAATAACAAGGTTTCTGATGAAGACATGGCAACCAGCATGAGTAGAAGAAAAGGGATCCCTCATAGATCCCCACTGTGTTAG 738 0.4444 MGYQKPAWLEALYTQKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVMKHYKDLSPYLRTCNSLQLSPDFLIPQETVDEEMTRSTIVDCDEPMSSCSGSSGSENNMSMSCTEIVRKRRSGWSTVCAKFMANSNNKVSDEDMATSMSRRKGIPHRSPLC 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01126 245 MobiDBLite consensus disorder prediction 226 245 - -
Vimu7g01126 245 Pfam PLATZ transcription factor 60 131 IPR006734 -
Vimu7g01126 245 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01126 Vimu-Chr7 10966643 10967685 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vimu7g01126 PLATZ 4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01126 - - gmx:100785737 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01126 7 10966643 10967685 Vimu7g01126 7 10966643 10967685 ECH