Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01121 ATGTTGAGAGTGAAGGGAGGGAAAAGGCCACCTTGGGTTGGACTTGGAGCTGCCGTCTGGGTTCAGATTTGTTCAGGAAATGGCTACACTTTCCCTCTCTACTCTCATTCCTTGAAATCCGTTTTGGGTTTCAACCAGAGCCAGATTACTCTGCTTGGTGTTGCCAATGATATTGGTGAGAACGTTGGCATTCTTCCTGGTCTCGCCTGCAACAAGTTCCCCCCTTGGCTCATTCTTCTCATTGGTGGTCTCTTATCATTCCTTGGTTTTGGTGTTCTCTGGCTCGCTATTTCCAAAACATTTGATTGCGTTCCTTTCGTTGTGCTATGGCTTGCACTTGTTGTAGCTACCAACAGCTGTGCATGGTTATCTACTGCTATTCTAGTCACCAACATGAGAAATTTCCCTGTCAGTAGAGGCACAGTTGCAGGAGTCCTGAAAGGTTATTCGGGGCTCAGTGCTGCAGTTTTTACGGAAATTTACAGCGTGGGTTTTCATAATTCTTCACCCAACTTCCTGTTGTTCCTTGCCATTGGTATTCCTGCTTTATGCTTTAGTACCATGTTTCTTGTTCGGCCTTGCACTCCGGCGTCCGGTGAAGATTCTTCTGAAAACAGTCATTTTCTGTTCGTCCAAGGTGCTAGTGTAGCCTTGGGTTTATACTTACTTGCAACAACAATACTTGACAACTTTGTCCCAATGAGTCATACAGTATCATTTGTTATGTTGGCTGTGATGATTCTCCTTCTCTTGGCTCCCCTTGCAATCCCTATCAAGATGACACTGTGCCCCAAAAAAGCATCTGCATCAGAAACACCAGAGCAACATGTTGGATCTTCCGACTTTCTGGTTCAAGATGGCAAGGTGGACAACACAGAACCCTTGCTATCATCTTCATCAACCAGTGGCTTTGGAAGTTTTAATGATGTGGATGGTTCAGCTGAGGTGGCCATGCTTCTCGCTGAGGGTGAGGGGGCAGTGAGGAAGAAGAGAAGGCCCAAGAGAGGGGAAGATTTTAAGTTTACGGAGGCTCTCGTTAAGGCAGATTTCTGGCTACTGTTTTTTGTTTACTTTGTTGGGGTTGGAACAGGGGTTACTGTTCTGAATAATTTGGCTCAAATTGGCATTGCACAAGGTATGGAAGATACCACTGTTTTGCTGTCATTATTCAGCTTTTTCAATTTTGTGGGTCGGCTAGGTGGAGGAGTTGTTTCAGAACATTTTGTCAGGACAAAAACGATTCCAAGGACAATTTGGATGACATGCACGCAGATAATTATGATATTCTTGTACCTTCTCTTTGCATATGCTATCAAGGGAACACTTTATCCTGCAATTGCAGTTCTTGGCATCTGCTATGGCGTGCAATTTTCCATAGTGATTCCCACTGTTTCAGAGCTTTTTGGGTTGAAACACTTTGGTTTGTTGAGCAACTTCATGGGTCTGGGGAATCCACTTGGTGCATCACTTTTTTCGGCTCTTCTAGCAGGACACGTATATGATAACGAGGCAGCAAAACAACATGGCGAAGGCCTCATTGCTTCAGGTGTTGCATGTATTGGTCCAAGTTGTTTTCAGCTAACCTTTTTCACTCTGGCTGGTGTGTGTGTTGCGGGTACTCTCACCAGCATTATCTTGACTATAAGAATTAAGCCCGTTTACCAAATGCTTTATTCTGGGGGTTCGTTTAAGCTACCTCAAACTTCAGGCCACTAA 1716 0.4458 MLRVKGGKRPPWVGLGAAVWVQICSGNGYTFPLYSHSLKSVLGFNQSQITLLGVANDIGENVGILPGLACNKFPPWLILLIGGLLSFLGFGVLWLAISKTFDCVPFVVLWLALVVATNSCAWLSTAILVTNMRNFPVSRGTVAGVLKGYSGLSAAVFTEIYSVGFHNSSPNFLLFLAIGIPALCFSTMFLVRPCTPASGEDSSENSHFLFVQGASVALGLYLLATTILDNFVPMSHTVSFVMLAVMILLLLAPLAIPIKMTLCPKKASASETPEQHVGSSDFLVQDGKVDNTEPLLSSSSTSGFGSFNDVDGSAEVAMLLAEGEGAVRKKRRPKRGEDFKFTEALVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGMEDTTVLLSLFSFFNFVGRLGGGVVSEHFVRTKTIPRTIWMTCTQIIMIFLYLLFAYAIKGTLYPAIAVLGICYGVQFSIVIPTVSELFGLKHFGLLSNFMGLGNPLGASLFSALLAGHVYDNEAAKQHGEGLIASGVACIGPSCFQLTFFTLAGVCVAGTLTSIILTIRIKPVYQMLYSGGSFKLPQTSGH 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01121 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 555 - -
Vimu7g01121 571 CDD MFS_Mch1p_like 10 540 - -
Vimu7g01121 571 Pfam Nodulin-like 11 258 IPR010658 -
Vimu7g01121 571 SUPERFAMILY MFS general substrate transporter 220 552 IPR036259 -
Vimu7g01121 571 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Vimu7g01121 571 Gene3D MFS general substrate transporter like domains 347 554 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01121 Vimu-Chr7 10925885 10928406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01121 2 571 Nodulin-like Gene Family AT1G80530 56.818 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01121 - - gmx:100787328 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01121 7 10925885 10928406 Vimu7g01121 7 10925885 10928406 ECH
Vimu7g01121 7 10925885 10928406 Vimu10g00680 10 5823980 5826232 PCT