Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01042 ATGGGTCGATCAAGGAATGTGGCAATTCTTGTAGTAATAACTGTAATGTTACTAAAGACCACAGAAGCTGAAGATTACGAGGTGGGAGGTAACACAGGTTGGACAAGCTTTCCTCCAGGAGTGTTCAACTTCGAGTCTGGAAGCCACAGTGTGGTGGAACTTTCGAAAGCTGACTATGAAAACTGTGGAGTCGACAACAATATCAAAAGCTTTAATATAGGGCCAGCTAGAGTCACCCTCACAGGCCATTGCAGCAGTGGCCAAAAGCTAAGCGTTACAGTTGAAGCTTCTTCACCTTCTCCTTCTGCATCACCCCAAACTCATTCAACTGATATAGCCCCTCCACCACACAGCTCAGCCACCCCTCTGGCTTCTACCTTCTCTCTGTTCATCATCACCATTCAATCAGATTCACATGACCTTCATAAAATTGAAGAGAATGTTTCAGAAAGAGGATATTGGATGTACATCGATTTCATTAAGCCTGTTGGATTTCCAAAATCTTGA 507 0.4379 MGRSRNVAILVVITVMLLKTTEAEDYEVGGNTGWTSFPPGVFNFESGSHSVVELSKADYENCGVDNNIKSFNIGPARVTLTGHCSSGQKLSVTVEASSPSPSASPQTHSTDIAPPPHSSATPLASTFSLFIITIQSDSHDLHKIEENVSERGYWMYIDFIKPVGFPKS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01042 168 SUPERFAMILY Cupredoxins 23 94 IPR008972 -
Vimu7g01042 168 Gene3D - 23 107 IPR008972 -
Vimu7g01042 168 MobiDBLite consensus disorder prediction 91 119 - -
Vimu7g01042 168 Pfam Plastocyanin-like domain 41 83 IPR003245 GO:0009055
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01042 6 134 Phytocyanin Superfamily AT2G25060 27.108 3.19e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01042 - - pvu:PHAVU_003G166600g 151.754