Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01002 ATGGCTGCTCTCTTGAGAAGGTTTGCGAGAGCTACTCCGATACCGTTCGCTGCCCAATCCAACCCCTCTCACTCCAATCTCCGCCTTCCCTTCGCTGCTATCGCCGCCATTTCCGGCGGAGTCTCCTTCCTTTACTACTATTCCTCTCCCAGCCTCGTTCATTCGCAACAAACAGAACAAGAGGAAAGTAGAAATACCGCGCTCAACCCGGACAAATGGATCGAGTTTAAGTTGCAGGACACTGCCAGGGTTAGTCACAATACTCAGCTATTCAGGTTTTCGTTTGATCCCACTCAGAAATTGGGTCTGGATATTGCTTCTTGCATCCTTACAAGCATACGAATAACTGCAGGGCTCCATTGGGACAAGATGCTGAAGGAAAACCAAAATTTGTTGTACGCCCGGTGCTTGTTTCTGAATCTTCAGGTGTATCCTGAAGGGAAGATGAGCCAGCATTTTGCAAGCTTAAAACCAGGTGATGTTGTTGAAGTGAAAGGGCCCATTGAAAAACTCAGATATACTCCTAATATGAAGAAACAGATTGGCATGGTAAGCATATTCACACCTGTAGCCATGGACAATACTGGGATTGCTGGAGGCTCGGGAATTACTCCGATGCTTCAGGTAATTGAAGCTATTTTGAAGAATCCTGACGACAAAACTCAGGTATCATTACTTTATGCTAATGTCTCCCCAGATGACATTCTGCTTAAACAAAAGCTTGACATTCTAGCAACAAGCCACCCAAACTTAAAGATATTCTACACTGTTGATAATCCAACAAAAAATTGGAGAGGAGGTGCAGGTTATATATCAAAGGATATGGTTGTGAAAGGCTTACCTGCTCCTAGTGATGATACTCTTATACTGGTATGTGGACCTCCTGGGATGATGAAACAAATATCTGGAGAGAAGGCCAAGGACTGGACACAAGGAGAGGTTTCTGGCATCCTGAAAGAGGCTGGATACACTGAACAAATGGTTTACAAATTCTGA 996 0.4448 MAALLRRFARATPIPFAAQSNPSHSNLRLPFAAIAAISGGVSFLYYYSSPSLVHSQQTEQEESRNTALNPDKWIEFKLQDTARVSHNTQLFRFSFDPTQKLGLDIASCILTSIRITAGLHWDKMLKENQNLLYARCLFLNLQVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYTPNMKKQIGMVSIFTPVAMDNTGIAGGSGITPMLQVIEAILKNPDDKTQVSLLYANVSPDDILLKQKLDILATSHPNLKIFYTVDNPTKNWRGGAGYISKDMVVKGLPAPSDDTLILVCGPPGMMKQISGEKAKDWTQGEVSGILKEAGYTEQMVYKF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01002 331 Gene3D Translation factors 65 168 - -
Vimu7g01002 331 Pfam Oxidoreductase NAD-binding domain 197 301 IPR001433 GO:0016491
Vimu7g01002 331 PRINTS Cytochrome B5 reductase signature 288 296 - -
Vimu7g01002 331 PRINTS Cytochrome B5 reductase signature 195 214 - -
Vimu7g01002 331 PRINTS Cytochrome B5 reductase signature 159 173 - -
Vimu7g01002 331 PRINTS Cytochrome B5 reductase signature 233 244 - -
Vimu7g01002 331 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 160 329 IPR039261 -
Vimu7g01002 331 Gene3D - 192 331 IPR039261 -
Vimu7g01002 331 CDD cyt_b5_reduct_like 76 331 - -
Vimu7g01002 331 SUPERFAMILY Riboflavin synthase domain-like 64 176 IPR017938 -
Vimu7g01002 331 FunFam NADH-cytochrome b5 reductase 165 331 - -
Vimu7g01002 331 PANTHER NADH-CYTOCHROME B5 REDUCTASE 52 331 IPR001834 GO:0016491
Vimu7g01002 331 Pfam Oxidoreductase FAD-binding domain 76 173 IPR008333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01002 Vimu-Chr7 9817999 9822950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01002 62 331 NADPH P450 reductases AT5G17770 38.321 1.60e-53 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01002 K00326 - gmx:100781191 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01002 7 9817999 9822950 Vimu7g01002 7 9817999 9822950 ECH