Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00961 TGGCGGTGGGAGGGCGCAATGTGGAACTCTGCGGAGAACGCCTTCGCCAGATCGGCCTCCTTCAGGGAGCAAGGGGAAGACGAGGAGGCGCTACGCTGGGCGGCGCTGGAGAGGCTTCCTACTTATAAACGAGCGCGCCGGGGAATCTTCAAGAATCTCACTGGTGACATGAAGGAGATCGACGTTAGAGATCTCCAGTCGCAGGATCAGCGCCTTCTTCTTGAAAGGCTCGTCGACTGCGTGGACAATGATCCTGAGATCATCTTCCACCGCATGAGAAGTCGATTCAACGCAGTAGGTTTGGCGTTTCCGAAAATTGAAGTTCGATTTCAGAACTTGACTGTTGAGACTTACGTACATGTCGGTAGCAGAGCTCTGCCAACTATTCCTAATTTCATTTGTAATATGACAGAGGCTCTTTTAAGGCAGTTGCTGATATACAGAAGGAAGAGAAGCAAATTGACAATTCTAGCGGACATCAGTGGGATTATTAGACCTTCAAGGCTAACGTTGCTATTGGGTCCGCCAAGCTCCGGAAAAACAACACTACTATTAGCACTTGCTGGTAGGCTAGGACCCGGGTTGCAGATGTCTGGGAACATTACATACAATGGACATGGTTTGAAAGAGTTTGTTCCTCAGAGGACTGCTGCTTATATCAGCCAACAAGATTGGCATGTGGCAGAGATGACCGTGAGGGAAACTCTCCAGTTTGCTGGTCGTTGTCAAGGCGTTGGATTTAAATTTGATATGTTACTAGAACTTGCCAGAAGAGAAAAGAATGCTGGAATAAAACCAGATGAAGATCTTGATCTATTCATGAAGTCATTTGCTCTTGGGGGACTAGAAACAAATCTTGTGGTGGAGTACATCATGAAGATATTAGGTTTGGACATATGTGGTGACACATTGGTGGGAGATGAAATGCTCAAGGGCATCTCAGGGGGGCAAAAGAAACGTCTTACAACAGGTGAATTATTAATTGGTCCAGCAAGAGTGCTATTCATGGATGAGATATCAACTGGTCTTGATAGTTCAACTACTTATCAAATTATCAGATATCTTAAGCATTCAACCCGTGCACTTGATGCGACCACAATTGTATCTCTTCTTCAACCAGCACCCGAGACCTACGAATTGTTTGATGATGTTATTCTTTTGTGCGAGGGTCAGATTGTATATCAAGGCCCCCGTGAAGCTGCTGTTGATTTTTTCAGACAAATGGGATTCAGTTGTCCAGAGCGGAAAAATGTAGCAGATTTCTTGCAAGAAGTAACGTCTAAGAAGGACCAAGAGCAGTACTGGTCTGTTCTCGATCGCCCTTACCGATATGTACCTGTTGGAAAGTTCGCTGAAGCATTTTCCTTATATCGTGAGGGCAGGCTTTTGTCTGAGCAACTAAATATACCTTTCGATAGACGCCATAATCATCCAGCCGCCTTGGCAACTCTTAGCTATGGCGCCAAAAGGCTTGAACTTCTCAAGACTAATTATCAGTGGCAGAAGCTTCTCATGAAACGGAATTCATTTATCTATGTTTTTAAGTTTGTTCAGCTACTTTTGGTGGCCTTAATTACAATGAGTGTTTTCTTCCGAACAACAATGCACCATAATACAATTGACGATGGGGGCCTATATCTTGGAGCACTGTACTTTTCTATGGTTATTATTCTTTTCAATGGTTTTACCGAGGTGTCAATGTTAGTTGCAAAACTTCCAGTTCTTTACAAACACAGAGATCTGCACTTCTATCCTAGCTGGGCATATACACTGCCTTCTTGGTTCCTTAGCATCCCAACTTCCGCGATAGAGGCTGGATGTTGGGTGGCTGTCACATACTATGCAATTGGATATGATCCTTCGATTACTAGATTTTTTCAGCAGTTCTTGCTTTTCTTCTTTCTACACCAGATGTCTATAGGTCTGTTTCGTTTGATAGGATCTCTTGGCCGAAATATGATAGTATCCAATACCTTTGGATCCTTTGCCATGTTGGTTGTAATGGCTCTTGGCGGATATATAATTTCAAGAGACCGTATACCTGTTTGGTGGATATGGGGTTTTTGGATTTCTCCTTTGATGTATGCACAAAATTCAGCTTCAGTGAACGAATTTCGTGGACATTCTTGGGATAAGAAAGCTGGAAATCAGACGACCCACTCTTTGGGTTTGGAAGTACTAAAACAGCGGAGTTTGTATGCAGAAAGCTATTGGTATTGGATTGGTCTTGGGGCAATGGTTGGATACACAATTTTGTTCAACGTTCTGTTTACAATATTCTTGGCTTACCTTAATCCCATGGGAAGACAACAAGCTGTAGTTTCAAAGGATGAGCTTCAAGAAAGAGAAAAGAGAAGAATAGGTGAAAGTGTTGTTATTGAGCTGAGAGAGTACTTGCAGCGATCGGCATCAAGTGGAAAGCATTTTAAGCAAAAAGGAATGGTTCTTCCATTTCAACCACTATCCATGGTTTTCAGCAATATCAATTATTATGTGGATGTTCCTTTGGAATTGAAACAACAAGGGATATTAGAGGACAGGTTACCGCTGCTTGTTAATGTTACTGGATCCTTTAGACCCGGTGTGTTGACAGCATTGGTTGGAGTAAGCGGTGCCGGAAAAACGACGCTGATGGATGTACTAGCTGGAAGAAAAACTGGTGGAATCATAGAAGGGGGTGTATATATATCTGGTTATCCCAAAAGACAAGACACTTTTGCAAGAATTTCTGGTTACTGTGAGCAGACTGATGTTCATTCTCCTTGTTTGACTGTTTGGGAATCCTTACTGTTCTCTGCTTGGCTTCGATTGTCTTCAGATGTTGACTTGGAGACACAAAAGGCCTTCGTTGAGGAGATAATGGAGCTTGTGGAACTCACCCCATTACGTGGAGCACTAGTGGGTCTACCCGGAATTGATGGTTTGTCAACTGAACAACGAAAACGGCTGACTATAGCAGTGGAACTGGTTGCCAACCCTTCTATAGTCTTCATGGATGAGCCCACTTCTGGATTGGATGCCCGTGCCGCAGCCATTGTGATGAGAACTGTGAGGAATATAGTTAATACTGGGAGAACAATAGTGTGCACGATCCATCAGCCTAGCATTGACATTTTTGAATCATTTGATGAGCTTCTGTGTATGAAAAGGGGAGGAGAGCTCATTTATGCTGGTCCACTTGGTCCTAAATCTAGTGAACTGATCAGTTATTTTGAAGCAATAGAAGGAGTTCCAAAGATCAGGCCTGGATATAACCCTGCGACGTGGATGCTAGAGGTTACATCGTCGGCTGAAGAAAACCGACTTGAAGTGGACTTTGCAGAAATCTACAGAGGATCAAGCTTGTACCAATATAACCAAGAGTTGGTTGAAAGGTTGAGCAAGCCAAGTAGTAATTCAAAAGAATTACATTTTCCAACCAAGTACAGTCGTTCACCTTTTGAGCAGTTCCTAACTTGTCTGTGGAAGCAAAATCTTTCTTACTGGCGTAACCCTCAGTACACTGCTGTTCGCTTTTTTTACACCGTCATCATCTCATTGATGCTCGGTACGATATGCTGGAGATTTGGTGCTAAAAGGGAGACGCAGCAAGATATATTTAATGCCATGGGATCCATGTATTCGGCAATCCTCTTCATCGGTATTACAAATGGCACAGCTGTTCAGCCTGTTGTTTCCGTGGAAAGATTTGTTTCTTATAGAGAAAGAGCTGCAGGGATGTATTCGGCATTATCATTTGCATTTGCTCAGGTCGTTATTGAATTCCCTTATGTGTTCGCACAGGCTATTATATACTCTTCAATATTCTATTCCATGGGTTCCTTTATCTGGACTGTTGATAGGTTCATTTGGTACTTATTCTTCATGTATTTTACGATGTTATATTTTACCTTCTATGGAATGATGACAACGGCTATCACACCAAATCATAATGTTGCTGCCATCATCGCTGCTCCATTTTATATGTTGTGGAATCTTTTCAGTGGTTTTATGATTCCTCGTAAGAGAATTCCTATTTGGTGGAGATGGTATTACTGGGCAAACCCAGTAGCCTGGAGTCTTAATGGTCTCCTGACGTCACAGTACGGTGGTGACAATCATTTGGTGAAGCTCTCTGATGGGAACAAGATGAGCATAAGACAATTACTTGAAGCAGTGTTTGGATACAAACATGATTTCTTGTGTGTTACAGCTGTTATGGTGGCTGGGTTCTGCATATTTTTCGCAGTTATATTTGCCTTCGCAATTAAATCCTTCAATTTCCAAAGGAGATGA 4275 0.4267 WRWEGAMWNSAENAFARSASFREQGEDEEALRWAALERLPTYKRARRGIFKNLTGDMKEIDVRDLQSQDQRLLLERLVDCVDNDPEIIFHRMRSRFNAVGLAFPKIEVRFQNLTVETYVHVGSRALPTIPNFICNMTEALLRQLLIYRRKRSKLTILADISGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGPGLQMSGNITYNGHGLKEFVPQRTAAYISQQDWHVAEMTVRETLQFAGRCQGVGFKFDMLLELARREKNAGIKPDEDLDLFMKSFALGGLETNLVVEYIMKILGLDICGDTLVGDEMLKGISGGQKKRLTTGELLIGPARVLFMDEISTGLDSSTTYQIIRYLKHSTRALDATTIVSLLQPAPETYELFDDVILLCEGQIVYQGPREAAVDFFRQMGFSCPERKNVADFLQEVTSKKDQEQYWSVLDRPYRYVPVGKFAEAFSLYREGRLLSEQLNIPFDRRHNHPAALATLSYGAKRLELLKTNYQWQKLLMKRNSFIYVFKFVQLLLVALITMSVFFRTTMHHNTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWAYTLPSWFLSIPTSAIEAGCWVAVTYYAIGYDPSITRFFQQFLLFFFLHQMSIGLFRLIGSLGRNMIVSNTFGSFAMLVVMALGGYIISRDRIPVWWIWGFWISPLMYAQNSASVNEFRGHSWDKKAGNQTTHSLGLEVLKQRSLYAESYWYWIGLGAMVGYTILFNVLFTIFLAYLNPMGRQQAVVSKDELQEREKRRIGESVVIELREYLQRSASSGKHFKQKGMVLPFQPLSMVFSNINYYVDVPLELKQQGILEDRLPLLVNVTGSFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGGVYISGYPKRQDTFARISGYCEQTDVHSPCLTVWESLLFSAWLRLSSDVDLETQKAFVEEIMELVELTPLRGALVGLPGIDGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLCMKRGGELIYAGPLGPKSSELISYFEAIEGVPKIRPGYNPATWMLEVTSSAEENRLEVDFAEIYRGSSLYQYNQELVERLSKPSSNSKELHFPTKYSRSPFEQFLTCLWKQNLSYWRNPQYTAVRFFYTVIISLMLGTICWRFGAKRETQQDIFNAMGSMYSAILFIGITNGTAVQPVVSVERFVSYRERAAGMYSALSFAFAQVVIEFPYVFAQAIIYSSIFYSMGSFIWTVDRFIWYLFFMYFTMLYFTFYGMMTTAITPNHNVAAIIAAPFYMLWNLFSGFMIPRKRIPIWWRWYYWANPVAWSLNGLLTSQYGGDNHLVKLSDGNKMSIRQLLEAVFGYKHDFLCVTAVMVAGFCIFFAVIFAFAIKSFNFQRR 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00961 1424 CDD ABCG_PDR_domain2 820 1058 IPR034003 -
Vimu7g00961 1424 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 8 1424 - -
Vimu7g00961 1424 FunFam ABC transporter G family member 34 837 1069 - -
Vimu7g00961 1424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 414 IPR027417 -
Vimu7g00961 1424 Pfam ABC transporter 852 1003 IPR003439 GO:0005524
Vimu7g00961 1424 FunFam ABC transporter G family member 34 144 448 - -
Vimu7g00961 1424 SMART AAA_5 860 1052 IPR003593 GO:0016887
Vimu7g00961 1424 SMART AAA_5 166 391 IPR003593 GO:0016887
Vimu7g00961 1424 Pfam ABC-2 type transporter 372 425 IPR043926 GO:0140359
Vimu7g00961 1424 Pfam Plant PDR ABC transporter associated 710 774 IPR013581 -
Vimu7g00961 1424 Pfam ABC transporter 158 339 IPR003439 GO:0005524
Vimu7g00961 1424 Gene3D - 836 1066 IPR027417 -
Vimu7g00961 1424 Pfam ABC-2 type transporter 1148 1361 IPR013525 GO:0016020|GO:0140359
Vimu7g00961 1424 Pfam ABC-2 type transporter 495 705 IPR013525 GO:0016020|GO:0140359
Vimu7g00961 1424 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 141 414 IPR003439 GO:0005524
Vimu7g00961 1424 Pfam ABC-transporter N-terminal 82 132 IPR029481 -
Vimu7g00961 1424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 836 1059 IPR027417 -
Vimu7g00961 1424 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 823 1076 IPR003439 GO:0005524
Vimu7g00961 1424 Gene3D - 144 439 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00961 Vimu-Chr7 9376227 9386779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00961 859 1035 Calmodulin-binding Proteins AT2G36910 27.072 8.41e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00961 K08711 - gmx:100815410 2633.6