Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00924 ATGGCTGTTTCCTTCAAAGCCTCATACCCACTTTTCCTTTGCTTGATTCTTTTCTATGGCGTCAATTGCGCTGAGTTTGAAGTTGGAGGCCATGGAGGTTGGGTTGTCCCAAAGACAAAGGATGATGCTCAAATGTTCAATCAATGGGCATCCCAAAACAGATTCAGGATTGATGACAATCTTCTTTTCAAGTACGAGAAAGACTCAGTTATGGAGGTGACTGAAGAAGAATATGAAAAATGTGTATCACCCCATCCCCTCTTTTTCTCCAACAATGGTGACACTGTGTTCAAGTTTGACAGACCAGGCTTGTTCTACTTCATCAGTGGTGTTCGTGGTCACTGTGACAGAGGGCAGAAGATGATCATCAAGGTCTTGGATATTGAGGCAAGTCCCTCACCCCAATATGCAAATGGCACTGCACCAAAGCCACATTCAAAAAGTGGAGTTGCTGAACTTACTCCTATGAGGATCATGACAGAGTCCACAGTTTTTGTTATGTCAACCTTCTTCCTTCAGCTTTATGTTTGA 531 0.4313 MAVSFKASYPLFLCLILFYGVNCAEFEVGGHGGWVVPKTKDDAQMFNQWASQNRFRIDDNLLFKYEKDSVMEVTEEEYEKCVSPHPLFFSNNGDTVFKFDRPGLFYFISGVRGHCDRGQKMIIKVLDIEASPSPQYANGTAPKPHSKSGVAELTPMRIMTESTVFVMSTFFLQLYV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00924 176 SUPERFAMILY Cupredoxins 24 126 IPR008972 -
Vimu7g00924 176 PANTHER BLUE COPPER PROTEIN 25 141 IPR039391 GO:0009055
Vimu7g00924 176 Pfam Plastocyanin-like domain 44 119 IPR003245 GO:0009055
Vimu7g00924 176 ProSiteProfiles Phytocyanin domain profile. 24 127 IPR003245 GO:0009055
Vimu7g00924 176 CDD OsENODL1_like 24 126 IPR041846 -
Vimu7g00924 176 Gene3D - 23 130 IPR008972 -
Vimu7g00924 176 FunFam Early nodulin-like protein 1 23 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00924 Vimu-Chr7 8997115 8998134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00924 10 129 Phytocyanin Superfamily AT1G48940 57.500 2.84e-54 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00924 - - var:108327897 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00924 7 8997115 8998134 Vimu7g00924 7 8997115 8998134 ECH