Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00917 ATGGCTGGGGGTAGAAGGAGGAGGCATCACTTCGGTAGAATCCATGCATTCACGTGTGGGAAAGCTTCCATGAAAGAAGAACATTCACTGATTGGAGGCCCTGGGTTCTCAAGGAAAGTCTATTGCAATGACCCTGAACGTGCCACCGCGAGTCTTCTCAATTATGGAGACAATTATGTCAGAACAACTAAGTACACATTGGCCACGTTCCTCCCCAAGTCCTTGTTTGAGCAGTTCAGGAGGGTTGCAAATTTCTACTTCCTCGTTTGTGCAGTTTTGTCTTTCTTTCCTGTGTCTCCTTACTCTGGAGTCAGTAATGTTGTCCCTCTACTGGTTGTGGTAGCTGCCACAATGGCCAAAGAGTTCGTTGAAGATTTTAGAAGAAAACAACAGGATATAGAGATGAATAACAGAAAAGTTAAAGTGCATGGTGGAGGTGGTGATTTTGCCTATTCTAAATGGAGGGATTTGAAAGTTGGAGATATAGTGAGGGTGGAAAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTTGCGTCAAATTATGATGATGCAATTTGCTATGTTGAGACTATGAATCTTGATGGAGAGACAAATCTGAAACTGAAACAAGCATTGGAAGAAACTTCAAAGTTGCAAGAAGATTCGAGCTTTCAAAATTTCAGGGCTGTCATCACATGTGAAGATCCAAATGCAAATTTGTACGCATTTGTTGGAAGCATGGAGTTTGGGGATCAACAGTATCCTCTTGCACCTCAACAGCTACTTCTCAGGGACTCTAAGCTGAGGAACACAGATTTTGTTTATGGTGTGGTAATCTTTACTGGACATGATACAAAGGTTATGCAGAATGCAACAGACCCGCCATCCAAGAGAAGCAAAATTGAGAAAAGGATGGATAAAATTATCTACTGCCTCTTCTTTCTACTTATTTTGATTTCTTTCATTGGGTCCATATTCTTTGGGATTACAACAAATGATGACATTGAAAATGGAAGAATGAAGAGATGGTACCTTAGACCAGATGATACCGAAATTTTCTATGACCCTAATGAACCGGTTGCTGCTGCAATTCTGCATTTCTTGACAGCACTTATGTTGTACAGTTACTTGATTCCGATTTCCTTGTATGTATCCATTGAAATTGTGAAGGTTCTTCAAAGCATTTTCATCAACCAGGATGCGAATATGTATTATGCGGAAACTGACAAGCCAGCACATGCTCGTACATCAAATTTGAATGAAGAACTTGGCCAAGTAGATACCATACTTTCAGATAAGACAGGAACTTTGACTTGTAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGGGTTGCTTATGGCCGAGGAGTTACAGAAGTTGAGAGAGCTCTATCAATGAGACATGAATCAGATTCAGGTAAAGAGTTGAAAGAAAACAACAGTGCAATGGTTCGTGAATCAAAGCCATCCATTAAAGGGTTTAACTTTATGGATGAAAGGATCATGAATGGAAATTGGATCAAAGAACCCAATGCCAATGTAATCCAGAATTTCCTAAGGCTTCTCGCTGTATGCCACACTGCAATACCAGAAGTTGATGAAGGAACTGGGAAGGTTTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCGGCCAGGGAACTTGGATTTGAATTTTATGAAAGGACACATGCAGCTATTTCACTGCGTGAATTAGACCCCATAACAGGCCTGAAAGTTGAAAGGTCCTACAAACTTCTGAACGTATTAGAGTTTAGTAGTGCAAGAAAGCGGATGTCTGTAATAGTAAGAGATGAGGAGGGGAAACTGTTGCTTCTCAGCAAAGGCGCTGACAGTGTAATGTTTGAAAGAATTGCAAAGAATGGAAGGCAATTTGAAGAGAACACAAAGCAGCACATCAGTGAATATGCTGATTCTGGTTTGAGGACCTTGATACTTGCATATCGTGAACTTAATGAGGAAGAGTACTATCAATTTAATAAAGAGTTCACAGAGGCCAAGAACTTAGTGAGTGCAGACCAGGAGCAGCATGTTGAGAGCATAATACAAAATATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTACAAGATGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCTGGGATTAAGCTATGGGTTTTAACTGGCGATAAAATGGAGACAGCAATTAATATAGGATTTGCTTGTAGCTTACTCAGACAAGGAATGAAACAAATTATAATTAGCTCAGATACTCCAGAAATCAAATCATTGGAGAAAATGGAGGACAAGGCTGCTGCTGATGCGGCAATTAAGTCAAGTGTTATTCGGCAACTAAGGGAGGCAAGTGCTTTACTTTCTTCATCAGATGAAAGCTATGAGGCCTTAGCCCTGATCATTGATGGGAAGTCTCTTACATATGCACTGGAAGATGATGTAAATGATTTGTTTCTTGGACTTGCCACTGGCTGCGCATCTGTTATCTGCTGTCGTTCCTCTCCCAAGCAGAAAGCACTTGTTACAAGACTTGTAAAGATGAGAACTGGTAGTACAACACTAGCAATTGGAGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGTATTAGTGGTGTGGAAGGCATGCAGGCAGTTATGTCAAGTGACATTGCAATAGCCCAATTTCGGTTTCTTGAGCGGTTGCTTCTTGTGCACGGACATTGGTGTTACAGAAGGATATCATCAATGATCTGCTACTTCTTTTACAAGAATATTACCTTCGGCTTCACTCTGTTCTTCTTTGAGATATATGCCTCATTCTCCGGCCAGGCTGCATACAATGATTGGTTCATGTCACTATATAATGTCTTCTTCACTTCACTTCCTGTAATTGCATTGGGAGTGTTTGATCAGGATGTCTCTTCCAAACTATGTCTCAAGTTTCCATTATTATACCAAGAAGGCATCCAAAACATTCTATTCAGCTGGAAACGGATCATCGGTTGGATAGTTAATGGAGTTGTGACTTCTGCCATCATATTCTTCTTCTGCATCCGTACCATGGAACATCAGGCATTCCGCAAAGGGGGTGAAGTGGTGGAGCTGCAAGTTCTTGGTGCCACCATGTACACCTGTGTTGTGTGGGTGGTGAATTGTCAAATGGCATTATCTATCAGTTACTTCACTTATGTACAGCATATATTCATCTGGGGAAGCATCATATTCTGGTATATATTCCTCATGGCATATGGAGCCATAGACCCTTCCTTCTCCACCACTGCCTATAAGGTCTTTGTTGAAGCTCTTGCACCGGCACCATATTTCTGGATCATCACTTTACTCATTCTCATTGCTTCCCTTCTTCCATATTTCGTCTATGCTTCCATCCAAATGCGTTTCTTCCCCATGTACCATCAAATGATTCAGTGGATAAGGAAGGACGGCCAAACAAGTGATCCAGAATACTGCAATGTGGTAAGGCAGCGATCGATAAGAAACACCACAGTTGGATTCACAGCTCGTTTGGAAGCATCCAAACGTTTTAATGCATCCAGAAGAGTTGAATCAAGCACAAAACCTGAAACAACATCCATAATATTTGAATCATCCAAACGTTCTGAAGGGCAGTCTGATGACCGATAA 3654 0.4108 MAGGRRRRHHFGRIHAFTCGKASMKEEHSLIGGPGFSRKVYCNDPERATASLLNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVCAVLSFFPVSPYSGVSNVVPLLVVVAATMAKEFVEDFRRKQQDIEMNNRKVKVHGGGGDFAYSKWRDLKVGDIVRVEKDEFFPADLILLASNYDDAICYVETMNLDGETNLKLKQALEETSKLQEDSSFQNFRAVITCEDPNANLYAFVGSMEFGDQQYPLAPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVMQNATDPPSKRSKIEKRMDKIIYCLFFLLILISFIGSIFFGITTNDDIENGRMKRWYLRPDDTEIFYDPNEPVAAAILHFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDANMYYAETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALSMRHESDSGKELKENNSAMVRESKPSIKGFNFMDERIMNGNWIKEPNANVIQNFLRLLAVCHTAIPEVDEGTGKVSYEAESPDEAAFVIAARELGFEFYERTHAAISLRELDPITGLKVERSYKLLNVLEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERIAKNGRQFEENTKQHISEYADSGLRTLILAYRELNEEEYYQFNKEFTEAKNLVSADQEQHVESIIQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPEIKSLEKMEDKAAADAAIKSSVIRQLREASALLSSSDESYEALALIIDGKSLTYALEDDVNDLFLGLATGCASVICCRSSPKQKALVTRLVKMRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFFEIYASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGIQNILFSWKRIIGWIVNGVVTSAIIFFFCIRTMEHQAFRKGGEVVELQVLGATMYTCVVWVVNCQMALSISYFTYVQHIFIWGSIIFWYIFLMAYGAIDPSFSTTAYKVFVEALAPAPYFWIITLLILIASLLPYFVYASIQMRFFPMYHQMIQWIRKDGQTSDPEYCNVVRQRSIRNTTVGFTARLEASKRFNASRRVESSTKPETTSIIFESSKRSEGQSDDR 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00917 1217 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Vimu7g00917 1217 Gene3D - 114 286 - -
Vimu7g00917 1217 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1139 IPR023298 -
Vimu7g00917 1217 Gene3D - 537 696 IPR023299 GO:0000166
Vimu7g00917 1217 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Vimu7g00917 1217 PRINTS P-type cation-transporting ATPase superfamily signature 861 880 - -
Vimu7g00917 1217 PRINTS P-type cation-transporting ATPase superfamily signature 747 757 - -
Vimu7g00917 1217 SUPERFAMILY HAD-like 419 916 IPR036412 -
Vimu7g00917 1217 Pfam Phospholipid-translocating P-type ATPase C-terminal 889 1139 IPR032630 -
Vimu7g00917 1217 MobiDBLite consensus disorder prediction 1192 1208 - -
Vimu7g00917 1217 Pfam Cation transport ATPase (P-type) 532 622 - -
Vimu7g00917 1217 SFLD p-type atpase 406 912 IPR044492 -
Vimu7g00917 1217 FunFam Phospholipid-transporting ATPase 539 697 - -
Vimu7g00917 1217 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 487 699 IPR023299 GO:0000166
Vimu7g00917 1217 CDD P-type_ATPase_APLT_Dnf-like 57 1021 - -
Vimu7g00917 1217 FunFam Phospholipid-transporting ATPase 116 286 - -
Vimu7g00917 1217 SFLD C1.7: P-type atpase like 406 912 - -
Vimu7g00917 1217 NCBIfam HAD-IC family P-type ATPase 359 446 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu7g00917 1217 NCBIfam HAD-IC family P-type ATPase 832 944 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu7g00917 1217 Gene3D - 697 901 IPR023214 -
Vimu7g00917 1217 NCBIfam phospholipid-translocating P-type ATPase 55 1146 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vimu7g00917 1217 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 1152 - -
Vimu7g00917 1217 FunFam Phospholipid-transporting ATPase 697 901 - -
Vimu7g00917 1217 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Vimu7g00917 1217 MobiDBLite consensus disorder prediction 1189 1217 - -
Vimu7g00917 1217 SUPERFAMILY Calcium ATPase, transduction domain A 146 285 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00917 Vimu-Chr7 8919211 8926240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00917 10 1187 Primary Pumps ATPases AT3G25610 70.678 0.0 1781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00917 K01530 - gmx:100799312 2124.75