Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00911 ATGGAGATTTCTGCCATGGCTTCTTCAGCTACTCCAAGACCTTCTCTTCCAACTCCTTCTCCACATCCAGTAGTCCCCACTTTTTCCAAACCTAAACTCAGACGCAACCACATAGCATTGCCAACCTCATCCACCATTTCGCTCCTCGCTCTCTTCGCCCCTCCCAACGAAGCCAAAGCCGCTGTTTCCATCGCCAAGGACCAGATTGTTTCGTCTCTCACCCAAGTTGAGAAAACGATTGACCAGGTTCAGGAAGTGGGTTCGAGTGTTTTGGACACGGCACAGCGTGTTGCTGAGGTAATTGGGAACGCTTTGAAGCCTGGCATCGAAACGGCGTTGCCAATTGTGCAGCAAGCTGGGGAAGAGGCCTTGAAAATTGCTTCCCCTGCCATTTCTGAAGCTTCCAAGAAAGCCCAAGAAGCGCTGCAAAGCTCTGGTGTTGATACCCAACCTGTTATCACTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACGACCAAGGTGATTGATGTTGCCAAGCCAATAGCTTCTTCAACCGTTGAAACCATATCCTCTTCAGACCCTACTGTGATTGCTGGAACTGCAGGAGCACTATTTGTTGCCTACCTCCTGATTCCTCCTATCTGGTCTGTCATCTCCTCTAATCTTCGTGGTTACAAAGGAGACCTAACTCCTGCTCAAGCCCTTGATTTGATATCTGCACAAAACTACGTTTTGATTGATATCAGGTCAGAGAAAGATAAGGACAAGACTGGTATCCCTCGCCTTCCGACTAGTGCTAAAAACAGGCTGGTTGCCATTCCTTTGGAAGAACTGCCAAGTAAGCTCAGAGGGCAGGTGAAGAATGTGAAGAAGTTGGAAGCTGAGATAGTGGCTTTGAAGATTTCTTATCTGAAGAAAATCAACAAAGGCAGCAACGTTGTGATCCTGGACTCGTATTCGGACGTAGCAAAAACAGTGGGAAGAACACTGACTAGCCTTGGTTTTAAGAACACATGGATCGTTGCTGGTGGATTCTCTGGAAACAAAGGGTGGTTGCAGAGTAGATTAGGAACAGATTCTTATAACTTTTCGTTCGCAGAGGTGCTGTCACCATCCAGGATCATCCCTGCTTCTGTGAGAGCTTTTGGCACAACTAGCCAATCTAGCACTAAGCTTCTTCCCGGGGCTGACTAA 1179 0.4775 MEISAMASSATPRPSLPTPSPHPVVPTFSKPKLRRNHIALPTSSTISLLALFAPPNEAKAAVSIAKDQIVSSLTQVEKTIDQVQEVGSSVLDTAQRVAEVIGNALKPGIETALPIVQQAGEEALKIASPAISEASKKAQEALQSSGVDTQPVITAAKTVADAAQQTTKVIDVAKPIASSTVETISSSDPTVIAGTAGALFVAYLLIPPIWSVISSNLRGYKGDLTPAQALDLISAQNYVLIDIRSEKDKDKTGIPRLPTSAKNRLVAIPLEELPSKLRGQVKNVKKLEAEIVALKISYLKKINKGSNVVILDSYSDVAKTVGRTLTSLGFKNTWIVAGGFSGNKGWLQSRLGTDSYNFSFAEVLSPSRIIPASVRAFGTTSQSSTKLLPGAD 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00911 392 CDD RHOD 228 342 - -
Vimu7g00911 392 Gene3D - 221 360 IPR036873 -
Vimu7g00911 392 SMART rhod_4 224 352 IPR001763 -
Vimu7g00911 392 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 41 353 IPR044690 GO:0009704|GO:0071277|GO:0090333
Vimu7g00911 392 ProSiteProfiles Rhodanese domain profile. 234 355 IPR001763 -
Vimu7g00911 392 MobiDBLite consensus disorder prediction 1 25 - -
Vimu7g00911 392 Pfam Rhodanese-like domain 225 342 IPR001763 -
Vimu7g00911 392 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 200 342 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00911 Vimu-Chr7 8886780 8889930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00911 5 313 Sulfurtransferasese or Rhodanese AT5G23060 67.419 3.71e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00911 - - gmx:100813363 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00911 7 8886780 8889930 Vimu7g00911 7 8886780 8889930 ECH