LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g00894	ATGGAAAAGCCACTGGAGCGGCTAGAGACGAAGGGGAGTGCGAAGGAAGAAGCCACAGATGAAATATCATGGGTCGTTGAGAAGGCAGGACCTTCGGTTGAGCACCTCTTACCTGGAGGAATTGGGACTTACAGCATTAACCACATTTCGTATGTTAATAATAACAATAATAATAATAATCAAAGGCTTCCCAAAGCAGAGACGTCTCTTTTTGCGCGTCAGGCAACTAGTACGGACAGGAACGATGAGAACTCCAACTGCAGTTCGTATACTACTTCGAGCGGTTTCACTTTGTGGGAAGACTCATCGGGGAAGAGGGGCAAAACAGGAAAGGAGAATAATTCGGGCGACAGACCCTCTACTGGAGGTAAACCATAA	378	0.4656	MEKPLERLETKGSAKEEATDEISWVVEKAGPSVEHLLPGGIGTYSINHISYVNNNNNNNNQRLPKAETSLFARQATSTDRNDENSNCSSYTTSSGFTLWEDSSGKRGKTGKENNSGDRPSTGGKP	125

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu7g00894	125	MobiDBLite	consensus disorder prediction	74	125	-	-
	Vimu7g00894	125	MobiDBLite	consensus disorder prediction	74	100	-	-

Showing 1 to 2 of 2 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu7g00894	33	118	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT5G08130	51.087	4.64e-19	79.7

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu7g00894	-		-	gmx:100800999	168.703

Showing 1 to 1 of 1 entries

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu7g00894	7	8726991	8728263	Vimu7g00894	7	8726991	8728263	ECH

Showing 1 to 1 of 1 entries