Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00882 ATGGAAAGAATTCTTGAACGGTATGAGAGGCATTCGTATGCGGAGAAGCAAGAAGGTGCAGGTGATCAACCACCAAATGAAAACTGGGCTATAGAACACGAAAAATTGAAGGCTAGGGTGGAGGTACTACAGCGACATCAAAGGAATTTCATGGGAGAAGAGCTTGATAACATAAATCTTAGAGGACTTCAGAGTTTAGAACAACAACTTGATTCCGCCCTCAAACACATTAGATCACGAAAGAACCAAGCCATGCATGAATCTATTTCAGAGCTTCAGAAAAAGGATAAGGCTCTTCGGGAACGTAACAACTTGCTCGCCAAGAAGATAAAAGAAAAAGAGAAGGCACTGGTTCCTCAAGAACGGGAGGGGTTGCTAAATATCGGGGATGTGACTTCTCTTATGGTAACTAAGCCATTGGAGTCCCTGAATATTAGAGGCTCCCCAGAAGCGAGATGTAATGAAGGAACTCCAACATCAACTCAACCTAAAACCACAATTCCTCCTTGGATGATGACTCTTCCTACAGATGAATAG 537 0.4283 MERILERYERHSYAEKQEGAGDQPPNENWAIEHEKLKARVEVLQRHQRNFMGEELDNINLRGLQSLEQQLDSALKHIRSRKNQAMHESISELQKKDKALRERNNLLAKKIKEKEKALVPQEREGLLNIGDVTSLMVTKPLESLNIRGSPEARCNEGTPTSTQPKTTIPPWMMTLPTDE 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00882 178 ProSiteProfiles K-box domain profile. 26 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vimu7g00882 178 MobiDBLite consensus disorder prediction 148 168 - -
Vimu7g00882 178 Coils Coil 89 115 - -
Vimu7g00882 178 MobiDBLite consensus disorder prediction 1 17 - -
Vimu7g00882 178 MobiDBLite consensus disorder prediction 1 27 - -
Vimu7g00882 178 Coils Coil 63 83 - -
Vimu7g00882 178 Pfam K-box region 25 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vimu7g00882 178 MobiDBLite consensus disorder prediction 153 168 - -
Vimu7g00882 178 Coils Coil 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00882 Vimu-Chr7 8644861 8646920 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00882 1 172 MADS-box Gene Family AT5G60910 51.977 4.31e-54 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00882 K09264 K09260 gmx:100798351 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00882 7 8644861 8646920 Vimu10g00797 10 7038703 7045735 PCT