Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00877 ATGTCATCATCTCAATTCTGCTCTCTCTTTCTGCCTTTATCTGCGTCCTCAACCATCCTCACTTTTGATCTTTTCATCGCTGTTATGTCTCTCGTCGCCATTTTTGGCTACTGGTTGGTTCCTGGTGGTCTTGCTTGGGCTCTCTCCAAGTTCAGACAGGGAAATCCTCTCACCAACAAACCTGCCATTCCCGGACCTTCTGGTTTTCCGCTGCTGGGTCTTCTTTCTGCTTTCACAGGGCCTCTTACTCACAGAGTCCTTGCCAAGCTTGCTCACACCTTTGATGCCAAGCCTTTGATGGCATTCTCGGTGGGGTTTACTCGTTTCATCATCTCTTCTCATCCTGACACGGCCAAAGGAATCTTGAGCAGTTCAGCTTTCGCCGACCGTCCTATCAAGGAGTCTGCTTACGAGCTCCTCTTCCACCGTGCAATGGGGTTTGCCCCGTACGGTGAGTACTGGAGGAACCTGAGGAGGATTTCCGCCACTCACATGTTCTCTCCAAAGAGAATCGCCGCCTCCGGCGAGTTCCGGGCTGAAGTTGGGGCCCAGATGGTGAAAGACATCATGGAGCTGATGAGGAGAGATGGTGAGGTAGAGGTGAGAAAGGTGTTGCATTTCGGGTCCTTGAATAACGTGATGATGAGCGTGTTTGGGAAGAGTTATGTGTTTGGTGAGGGTGGTGATGGGTGTGAGCTTGAGGAGTTGGTGAGTGAGGGGTATGAATTACTTGGGGTGTTTAACTGGAGTGACCACTTTCCACTTTTGGGTAGGTTGGATTTGCAAGGTGTGAGGAAGAGGTGTAGGAGTTTGGTGGGGAGAGTGAATGTTTTCGTGGGAAAAATCATAGCGGAGCACAGGGAGAAGAGGGCTGCTGCAGGTGAGGATAAGGCGAAGGATAGTGAGAGCTCCGGCGACTTTGTTGACGTGCTTTTGGATTTGGAGGAAGAGAACAGGCTTCAACACGCTGATATGGTTGCTGTTTTGTGGGAAATGATCTTTAGGGGGACTGATACAGTGGGAATACTGGTAGAATGGATTCTTGCGAGGATGGTTATACACCCTGAAATCCAAGCTGAGGCTCAAAGAGAAATAGATTGTGTTGTTGGGTGTGAGCGGAGTGTGAATGACGATGACCTTGGGAAGCTTCCTTACGTGAGGGCCATAGTGAAGGAAACTCTGAGGATGCACCCACCGGGTCCTCTTCTGTCATGGGCGAGGTATTCAATCCATGACACAGAAATTGGCAAGCACTTTGTTCCAGCTGGAACCACAGCTATGGTTAACATGTGGGCCATCAGTCATGACAAAGAAGTGTGGTCTGAACCGGAAGAGTTCAAACCGGAGCGTTTTATGAAGGAGGAGGTGCAAATGATGGGGTCTGATATGAGGTTGGCACCTTTCGGGTCTGGGAGAAGGGTTTGCCCTGGGAAAGCTATGGGTGTGGCGAGCGTTGAGCTTTGGGTTGCTCTGTTGCTACAAAAGCTGAAATGGATGGCTTGTGATTGTGGTGTGGATCTGTCTGAATGCTTGGAACTGTCTATGAAAATGAAATGCTCTCTCATCACCAAAGTTGTTCCAAGACGACCTTCTGTAACCCATTCTGCTTCATCAATCAATCAATCAATCAACCCAACATAG 1641 0.4936 MSSSQFCSLFLPLSASSTILTFDLFIAVMSLVAIFGYWLVPGGLAWALSKFRQGNPLTNKPAIPGPSGFPLLGLLSAFTGPLTHRVLAKLAHTFDAKPLMAFSVGFTRFIISSHPDTAKGILSSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISATHMFSPKRIAASGEFRAEVGAQMVKDIMELMRRDGEVEVRKVLHFGSLNNVMMSVFGKSYVFGEGGDGCELEELVSEGYELLGVFNWSDHFPLLGRLDLQGVRKRCRSLVGRVNVFVGKIIAEHREKRAAAGEDKAKDSESSGDFVDVLLDLEEENRLQHADMVAVLWEMIFRGTDTVGILVEWILARMVIHPEIQAEAQREIDCVVGCERSVNDDDLGKLPYVRAIVKETLRMHPPGPLLSWARYSIHDTEIGKHFVPAGTTAMVNMWAISHDKEVWSEPEEFKPERFMKEEVQMMGSDMRLAPFGSGRRVCPGKAMGVASVELWVALLLQKLKWMACDCGVDLSECLELSMKMKCSLITKVVPRRPSVTHSASSINQSINPT 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00877 546 Gene3D Cytochrome P450 50 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00877 546 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Vimu7g00877 546 SUPERFAMILY Cytochrome P450 63 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00877 546 CDD CYP78 96 521 - -
Vimu7g00877 546 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00877 546 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00877 546 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00877 546 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00877 546 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00877 546 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00877 546 PANTHER CYTOCHROME P450 78A7-RELATED 15 529 - -
Vimu7g00877 546 Pfam Cytochrome P450 64 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00877 546 FunFam Cytochrome P450 78A5 56 528 - -
Vimu7g00877 546 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00877 546 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00877 546 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00877 Vimu-Chr7 8571883 8574131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00877 10 528 Cytochrome P450 AT1G74110 63.653 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00877 K20619 - gmx:100811042 827.009