Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00869 ATGGCAGCAAAGTTTTTGCATTCTTTAGCAGATGACAACCCAGATTTAAAAAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCATCACATTATTTCCTCTCCCCACATTACCCAGAAGAGGCTTCATCCAGGTTATTCCCTCTTCAATTATGACAGTTTGGAAAGAGGTTCTAATATCATACACCAGCCGCAATCAACAGCTGATATGAGGGGTATGAGTGATAAGCACAAAATTTCAGCTGAATCATCGAGAACCTCATTCTCTTCGTCTTGTTCATCATCCATGTCCTCTTTGGACTATAAAGCTGAAGCAGATGCTCCCTTTGATCGGATTGGTTTTCCTGAAACTCCTATGAGGGACCCAGTCATGAAGCAAGCAAGTACCTCTCCCCATTTAGGATGTCCATCCCTTGATCTGAGGGATGTGGTGAAAGAGTGTATATATAGGGAAGCCAGAGGACTGTGCAAAGAAAGGGATTCCCCTAGACAATTTCAGATGTCTAAATCTGTTGATAGAAAGCAAACACCTACTGATTTAAAGGAGTCCTTGCGAGTCCTTGCTATCCTTAGAGAAACACCTCGGCATTATGTTGAAGCTAAAGAACTTCCTAGATTATCAAATGAAGTAAAAGATGGACATTGGCATTCCATTTCAAAGGATGCTCCTCGGTTTTCTTATGATGGAAGAACAACATGTGAGGTATCTTTTGATTTGCATGATACCTTGAAATGCCCACAAAAGCTAAAAGAGCTTCCTAGACTTTCACTGGACAGTAGGGAAGGTTCATGGCGCGCAAACGGCTCTGATTCAAAACTCACTAACCTCTCAAGAAATTCCAATACAGGTGACGCCTCCACCTCAGTTGACAACATTTCTAGTCTACAACAGCGTTCAGCATCTCAGAGACGGCCACCTAGTATTGTAGCAAAGTTAATGGGCTTGGAAGCATTGCCAGAATCAAATGTGGCTAGTGATACCAAGTCAAGTTTGAGTGAAACTGACTCCACTCAAGGTAATGATCATTTTGGGAAAAATGGATTCGTTACACCACTTCCAGTTTCTAATTTCCCTGAATTCCCATTGAAAGAGAAAGAGATGACTTCCCCACGGTGGAAGAATCCCGATTTGGTTGTCAAACCAATATTGAGTACAAGGTTTCCCATTGAACCTGCACCGTGGAAGCAGCAGGATGGGAACCTAAGCTCTGAGAAACTAACTTCCAGGGTCATAAAGCCTACAGCAAGAACCCCGGATTCATTTCCTTCAGTTTATAGTGAGATTGAGAATAGATTAAAGGATCTTGAGTTTAAACAATCTGGAAGGGATCTCAGAGCACTCAAACGGATATTAGAAACAATGCAAGTAAAGGGTCTGTTAGAGACCAGAAAAGAAGAACAAGCTTCAAATGTTGTTAGAAATAAAAGAGACTATGAACTAAAATCGACCTCAATTCAGCATTCTACGAGGCAGGAAACAGTCTGGGAATCTGATTCTGCAATGGCTATAGAGTCACCAATAGTGATCATGAAACCAGCAAAAATTGTTGAAAAAAGTGGACCTTTTGCTTCTTCAGTCTTTCCAATTCATGAACTTTCTGATTCCGACAAACTTCAGAGTGGTGGTTTACATGTACATGGTAAAAAAGGGACACCTTCCAGTCAAATAGCCAAAGACCGGTCTCCTAGAAACAGTCCCAAGGATGCTTCTACCAGTTTTAGTGAAAAGAAAGCGAATAGTATCAAGACTATAAAATCCACACAATCCCTACCAAGGTCTACACAATTTCCAAAAGAAAATGGCCCAAGCTCAGTAAAGAGTTCAGGATCTGCTAGCCCAAAAATGCAACAGAAGAAGTCAGCATCGGAGAAGCAATCTTGCCTTCTTACCCCATCATCAGATTCAAATAATCCCAGAAGGCAGTTCTTTAAGCAGACAACACACTCAGGTTCTCCCAGTCAAAAACTGAGACCTAAAGTCCCTAATTCACAGAGCAGTGATGACAGACTCAGTGAGACTAGCAATGAACAAAGAAGTTTAAGTAGCCAGTGGGATGAAGTATCTCTGCAATCAGACAGTATCTCTTTCGACTCAAAGATGGATATTGAAGTTACCAGCAATTTACAATCTGCTGAAGTTGCTGATGGCCAATGCCCATCTAGGAAGGCTGTTGAGCATTTGGTTTCAGGATCCATGCATAAGAAATCAACTCTGAGGTGGGATGAGGATGAGTCAATTGCAGAACTTACAACACACGCCTCAGATCATCCAAGTCTCGGATCAGATGTTGATGTCTCGGCATACAAATTCGGTATGCCATCCCCAGTAAAGAATATATTCTATTCTCGTAAAGTTGAAAAGGCTCAAGAATCTAAAGAAAATTATCATACAGATCAGTGGAGCCCAGCAGAAGGCCTCTTGATTAACAATATAAGATATAGAGAGATCAACCACAAGAAATTGCAAAGCATAGGTCGCCTTATTCAAAAGCTTAGACAGCTAAACTCAAGTCATGATGAAACTAGAATAGATTACATAGCTTCCCTTTGTGAAAATACAAACTCAGACCACAGATACATTGCTGAGATACTATTGGCTTCGGGTCTACTTCTGAGAGCTTTGAGTTCTGAGCTGCTGACATTTCAACATCACTCATCAGGTCATCCCATTAACCCTGAGTTATTCCTTGTGTTGGAACAAACCAAGTTAAGTAGTTTGCTTTCGAAAGAAGGGGGCAGCGATGGAAAAATTGCTTACAGGAAGCTAAATACAGAGAAGTGGCACAGGAAACTCATCTTTGATACTGTGAATGAGATTCTTCGTACAAAGCTTGGCTCTTCTCGTGAGCCATGGTTCAAGCCTGATGGACTTACAAGGAAATTCGTCACTGCACAAAAGCTTCTTAAAGAACTATGCTTTGAGATACAAAAACTTAAATATGTGAAACCAGATAGCAAAGATGAAGGGGATGATCTGAAAAGTATGCTAGGGGAAGATGTGATGCGTCAGTCGGAAAATTGGACAGGTTTCCCTGGTGAATTACCCGGGGTTGTGTTGGATGTTGAGAGACAGATATTTAAGGACTTAATTGATGAATTTGTGATTGATGAAAGCTTGGGAGTAACGTATAGTAGGCACAGCAAGCTATTTGGAAAGTAG 3171 0.4119 MAAKFLHSLADDNPDLKKQIGCMTGIFQLFDRHHIISSPHITQKRLHPGYSLFNYDSLERGSNIIHQPQSTADMRGMSDKHKISAESSRTSFSSSCSSSMSSLDYKAEADAPFDRIGFPETPMRDPVMKQASTSPHLGCPSLDLRDVVKECIYREARGLCKERDSPRQFQMSKSVDRKQTPTDLKESLRVLAILRETPRHYVEAKELPRLSNEVKDGHWHSISKDAPRFSYDGRTTCEVSFDLHDTLKCPQKLKELPRLSLDSREGSWRANGSDSKLTNLSRNSNTGDASTSVDNISSLQQRSASQRRPPSIVAKLMGLEALPESNVASDTKSSLSETDSTQGNDHFGKNGFVTPLPVSNFPEFPLKEKEMTSPRWKNPDLVVKPILSTRFPIEPAPWKQQDGNLSSEKLTSRVIKPTARTPDSFPSVYSEIENRLKDLEFKQSGRDLRALKRILETMQVKGLLETRKEEQASNVVRNKRDYELKSTSIQHSTRQETVWESDSAMAIESPIVIMKPAKIVEKSGPFASSVFPIHELSDSDKLQSGGLHVHGKKGTPSSQIAKDRSPRNSPKDASTSFSEKKANSIKTIKSTQSLPRSTQFPKENGPSSVKSSGSASPKMQQKKSASEKQSCLLTPSSDSNNPRRQFFKQTTHSGSPSQKLRPKVPNSQSSDDRLSETSNEQRSLSSQWDEVSLQSDSISFDSKMDIEVTSNLQSAEVADGQCPSRKAVEHLVSGSMHKKSTLRWDEDESIAELTTHASDHPSLGSDVDVSAYKFGMPSPVKNIFYSRKVEKAQESKENYHTDQWSPAEGLLINNIRYREINHKKLQSIGRLIQKLRQLNSSHDETRIDYIASLCENTNSDHRYIAEILLASGLLLRALSSELLTFQHHSSGHPINPELFLVLEQTKLSSLLSKEGGSDGKIAYRKLNTEKWHRKLIFDTVNEILRTKLGSSREPWFKPDGLTRKFVTAQKLLKELCFEIQKLKYVKPDSKDEGDDLKSMLGEDVMRQSENWTGFPGELPGVVLDVERQIFKDLIDEFVIDESLGVTYSRHSKLFGK 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00869 1056 MobiDBLite consensus disorder prediction 326 348 - -
Vimu7g00869 1056 Pfam DUF761-associated sequence motif 300 327 IPR032795 -
Vimu7g00869 1056 MobiDBLite consensus disorder prediction 266 308 - -
Vimu7g00869 1056 MobiDBLite consensus disorder prediction 542 691 - -
Vimu7g00869 1056 MobiDBLite consensus disorder prediction 558 691 - -
Vimu7g00869 1056 MobiDBLite consensus disorder prediction 324 354 - -
Vimu7g00869 1056 MobiDBLite consensus disorder prediction 264 309 - -
Vimu7g00869 1056 Pfam Domain of unknown function (DUF4378) 860 1036 IPR025486 -
Vimu7g00869 1056 PANTHER LONGIFOLIA PROTEIN 1 1043 IPR033334 GO:0051513
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00869 Vimu-Chr7 8515188 8519657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00869 128 1055 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 43.563 2.72e-180 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00869 - - vum:124830690 1929.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00869 7 8515188 8519657 Vimu7g00869 7 8515188 8519657 ECH
Vimu7g00869 7 8515188 8519657 Vimu10g00810 10 7140986 7145882 PCT