Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00850 ATGTTACCTTGGCTTTTAGCTTTTGCTACTGGCAGTGTAGCAGCTATCCTTATTTACCGTTTTTTCAAGCTCAAAACCGCGCATTCATTACCACTGCCACCAGGGCCAAGCCCATGGCCCATAGTGGGAAACTTGCCTCACATGGGCCGTGCGCCACACCAAACTATTGCGGCCCTGGCCCATAAGTATGGCCCGCTCATGCACCTTCAGTTGGGGTTTGTCGACGTTGTGGTGGCGGCTTCCGCCTCCGTGGCGGAGCAGTTCTTGAAGGTTCACGATGCGAAGTTTGCAAGCCGGCCACGGAGCTTCGTGAACAAGTACATGAGTTATTACAAGGAAGACTTTGGGTTTGCTTCCTATGGCCCTCGGTGGCGGTTGTTGAGGAAAATAAGCTCCACTCACATGTTCTCTGGTAGGGCCATGGACGATTTTAGAGAAGTGCGTGAGGAAGAGGTACAAAGACTGACATGTGATTTGGCAAGTTCAGGCTCAAAAGCTGTGAAATTGGGACTGTTGTTGAACGTGTATGCCACCAACACATTGGCAAGGGTGATGATCGGACGAAGAGTTTTCAACGATGGAAACAGTGAGTGGGATCCAAAGGCAGATGAGTTTAAGTCCATGGTGTTGGAGCTCATGAACTTGTTAGGAGTTTTCAATATTGGCGACTTCATTCCATTCTTGGATTGGCTAGACCTTCAAGGAGTAAAAGCCAAAGCAAAAAAATTACGCAAGGGCTTTGACGCATTTTTAACCAGCATTCTTGAGGAACATCAGGTTTCCAAGAATGAGAAACACCAAAACACATACTTAACAACGTTGTTGTCACTCAAAGAAACTCCTCAAGATGGATATAATCTTTGTGAAGAGGAGATCAAAGCAATACTTTTGACAATGACATGTAGAATTGATCTTTTGCAGAACATGTTTGGAGCTGGAACAGACACTTCATCAAGCACAATTGAATGGGCAATGGCTGAACTGATCAGGAACCCAAGAATTATGGTTGAGGTGCAACAAGAAATAGACAGTGTTGTGGGTGAAGACAGACTTGTGACAGAACTTGACTTGCCCCAACTCCCTTACTTACAGGCTGTGGTGAAGGAAACATTGCGATTACACCCACCAACCCCTCTTTCTATTCCAAGATTTGCTGAAAAAAGCTGTGAGATATTTGGTTACCACATTCCCAAAGGTGCAACTCTCATGGTGAATGTTTGGGCCATAGGACGTGACCCTAAGGAGTGGTCAGACCCGTTGGAGTTCAAGCCCGAAAGGTTTCTCCCTGGTGGTGAGAAGGCTGGTGTTGATGTTAGGGGCAACAACTTTGAGGCTATACCCTTCGGCGCTGGTCGTAGAATATGTGCCGGTATGAGCTTAGGTCTGATGGAGGTTCAGCTGGTGACTGCTACCCTAGCCCATTCATTTAATTGGGAGTTAGAGAATGGAGTTGACCCAAAAAGTCTCAATATGGATGAAGCATATGGGCTCACCCTTCAAAGAGAAGTGCCTCTTTGTGTCCACCCTCGTCCTAGGCTCTCACGCCACTTGTATTCATCATCATCTCCATCATTTTGA 1578 0.4664 MLPWLLAFATGSVAAILIYRFFKLKTAHSLPLPPGPSPWPIVGNLPHMGRAPHQTIAALAHKYGPLMHLQLGFVDVVVAASASVAEQFLKVHDAKFASRPRSFVNKYMSYYKEDFGFASYGPRWRLLRKISSTHMFSGRAMDDFREVREEEVQRLTCDLASSGSKAVKLGLLLNVYATNTLARVMIGRRVFNDGNSEWDPKADEFKSMVLELMNLLGVFNIGDFIPFLDWLDLQGVKAKAKKLRKGFDAFLTSILEEHQVSKNEKHQNTYLTTLLSLKETPQDGYNLCEEEIKAILLTMTCRIDLLQNMFGAGTDTSSSTIEWAMAELIRNPRIMVEVQQEIDSVVGEDRLVTELDLPQLPYLQAVVKETLRLHPPTPLSIPRFAEKSCEIFGYHIPKGATLMVNVWAIGRDPKEWSDPLEFKPERFLPGGEKAGVDVRGNNFEAIPFGAGRRICAGMSLGLMEVQLVTATLAHSFNWELENGVDPKSLNMDEAYGLTLQREVPLCVHPRPRLSRHLYSSSSPSF 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00850 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Vimu7g00850 525 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PANTHER CYTOCHROME P450 98A9 12 519 - -
Vimu7g00850 525 Gene3D Cytochrome P450 25 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 Pfam Cytochrome P450 33 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00850 525 FunFam Cytochrome P-450 19 21 510 - -
Vimu7g00850 525 SUPERFAMILY Cytochrome P450 33 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00850 Vimu-Chr7 8369254 8371024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00850 17 522 Cytochrome P450 AT5G07990 61.373 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00850 K05280 - gmx:100778531 723.776