Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00821 ATGTTGTCTGTATGCAGTTGCAGAGAGACAGAACACAACACAGAGGCAAAGAGAGAGAAGGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAGACGGCTTTTCATTGGATCACGTCACCCACCTTTGCTTTTGCTCTCTTCTGCCTCTGAATTGAGCATTTCCGAGTTCTATTGGCCTCTGATCGAATTGGAAACAGCGCCATCAGATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGGTTTGCTTTCTCCCCATTTCCCTCTCGCCTTTACTTCCCCATTTTCTATTTCTTCATTGATTGTTCTGACACTAATTACTCTGGAGAAGGAAAAATAAAGCATTATGTGATTCATGGTGTTTTTGATTGTTGCTTCTCCCCGGATGTCTTGGAAGAAGAAGAATATAGAGTTTATATGGGGGGGATTGTGGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTATTCAACTTCAGAGAAGGGGAGAGACGCAGCCAAATCTCAGACATATTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAGTATGAGGGTTGTCCTGTTCTGCCGTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTCTGGAGGGGCAACAAAATGTGCTTTTGATGCATTGTGAAAGGGGAGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGTGGGGAGCAAAAGACTCTTGAAATGGTCTACAAGCAAGCTCCAAGGGAACTACTACACATATTGTCTCCTTTGAATCCACAGCCTTCGCATTTAAGATATCTTCAGTATATTTCCAGGAGAAGTTTGGGCGCTGAGTGGCCACCATCGGAAACACCCTTATACTTGGATTGTCTGATTCTTAGAGTCCTTCCAATATTTGACGATGGAAAAGGTTGCAGGCCCGTTGTACGTGTTTATGGTCAAGACCCTTCAATTTCTGCCACTAGAAGTTCAAAGCTTCTTTTTTCAACTTCACAATCCAAAAAACATGTTCGCCACTACCTACAGGCAGAGTGTATGCTCGTGAAAATTGACTTGCGTTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAGTGATGATTTTGTTCATGAGGAATTGATGTTTAGAGTTATGTTTCATACTGCATTTGTGCGGTCAAATATTTTGATGCTGAGCCGTGATGAAATTGATATTTTGTGGGAGGCGAAGGACCTATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAACCACAGTCACGGTGAGTGAAGATGCAAATGAGATTGAGAGTGCTGAGACAGAAAGTGCTTCACCTGATGAGTTCTATGAAGTAGAAGAAATCTTCAGCAGTGTAATTGATGCACAAGAAGGTAAGACAGAGTATGATTCTCAGGCTTTCCATGAAAATGCTGTGAATGATGAAACTCATAAGGGGGTCTGGAGGCAGAAGTCTGATCCTCATAGTTTTGAGGATTGTCCGCCAGATGACAAGATCACCAAGCAGGTTTACAAGATGGATCCTGGTATTAATACTGTGAAAGACATCTCTATTGATGATGCTCACTATAAATTTGATGGGAGCATAGATTCAGATCCTCATGCAGTGAAGGACATTGCTGTCGATGATGGAGAAATTAAGTCAACTTCCATTGCAGTTATTTCTGATATGATGAAACCTCCTCTGGAAACAAAGGAAGTTACCATGCATGTGCAGCAGGAGTTTGCAGTCATTGAAAATGAATATGATGAAGATAAGGAGGTAACAGAAAAGGAGCTCGACTCCAAGGCTGGGAACCAGATGCCTGATTTGACTGAACAAAAATCTGGTAAAGTACTTCCATCTACTGCCAAAAAACAACCTCCATCCAACTCGAAGCCAGTTGGAGATACAGTTGCAGCAAAGCAAAAGATTAAACAGCAAGAAACCCATGGTTTTCAGGCAAAACAAGCTAAGCCAAATGCCGTAACTAGATGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCACGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCACTGACAAATTTGTCTTCCACAAAAGAGAAAATTGAAGATTCCAAAACAAGATCTTTATCTGCTCCCGTTGTTTCTGCAGTTGTTGCTTCTATTGACAAAACAAATGACCTAAAAAGCCGGAAGGTGGTCACTTCAAAATCTTCTGGCTATATAGCAGCAGAAATAGATGAAAAAGGTCTTCCATCACCATTGTCATCAATTAAAGAGACATCTTTTCAGTCAGATACTCCAGCGCAAGAACAGAGCTTAGAACAACTGCTACAGCCTCCCCCACCACCTCCCCCTCCCCCTCCTGCTCACAGCAGAGTCTCTTCTCAAGTTTTTGAATCCTCATCATTAAAGGATGATGTATCAGCTCAAGGCTCTCCATCTCCTGTAGTATCACCATCTTCTTTGGGTGGAAAAGGGTCCCTCATGCCACCGCCACCACCTCCTCCTCCACCACCACCATTTCAACCTTCAACTTTAACAGCATTTATGAGACCACCTGAAACTTCTCTTCCTTTCCCTCCACCCCCACCCCCACCCCCGCCCCCCTTCTTTGGGCAAAATGTAGGGAGTTTAGTACCATTTGCATCCCCTAGGAAATCTGTGGCTTCATCAATGGTTGGAGAGACTAGTGTATCTTTAACACTTCGTACAACCCCTTTTCCGTTTACAAGCACTGACGTTACACTGGATGTTTCTCAAGTAGGTACTGCAGTGATCCCTTCACAGCCTCCTCCACCGCCACCACCTCCAAGGTATGAAGTTTCATCTGTTCCTTCTTTGACACCACTAGCATCACCTCTTCCAAAGAATGAAATTCCATCAGTTCCCCCTCCTCCCATGTTTCCTACAGCTTCAACAAATAGGGCTCCACCCCCTCCTACCCCAACACCCTCAATTGCATCACATAAAGGTTCACCTCCACCAGCAACCCCACCTCCAACTCAACCCCTGTCTCAGCCTCCCCCTCCGCCCCCCCCTCCCCCTCCCCCACCCAATTCACATATATATTCAGCTACACCACCTATAGCTAATTCACATGTATATTCAACTACACTACCTATACCTCCGCCACCACCTCCCCCTCCTTTTGGTAAAGCTTCATTACCTCCCTCTCCACCTCCTTTCAATAGTCCTCTTCCACCACCACCACCGCCACCACCTCCTTTTAGTCAAGCTCCACCACCACCACCACCACCTCCACCCACACTTCCTTCCCCACCTCTTCCTCTATCAACTGTGGCCTCTCCTCCACCTCCTCCAATGTATAAAGCCGCACCTCCCCCACCACCACCTCTTCCTCCATCAAGTGGAGCCTCACCTTCGCCACCGCCACCACCACCTCTTCCTCCATCAAATGGAGCCCCACCTCCACCTCCACCACCTCTTCCTCCATCAAGTGGAGCCCCACCTCCACCTCCACCACCTCTTCCTCCATCAAGTGGAGCCCCACCACCCCCTCCACCTCCAATGTATGGAGCACCACCAACTCCATCAATGTATGGAACACCACCTCCTCCTCCAAGCGGTCGAGGACCACCTCCTCCACCTCCTCCTCCAGGCAGTCAAGGACCACCTCCTCCACCTCCTCCTCCAATGTATGGAACACCACCTCCTCTACCCCCTCCATCGTATGGAGCACCACCTCCTGGTGGTCGAGGACCACCACCTCCTCCTCCCCCAATGTTTGGAGCACCACCTCCACTTCCTGGTGGTAGAGGACCACCACCTCCTCCTCCCCCAATGTTTGGAGCACCACCTCCACCTCTTGGTGGTAGAGGACCACCACCTCCTCCTCCCCCAATGTTTGGAGCACCACCTCCACCTCCTGGTGGTAGAGGACCACCTCCTCCACCTCCTCCTGGTGGTCGAGGTCCTCCTCCTCCACCTCCCCCAGGTGTTCCTGGTGCTCCTACACCTCCCGGGGGTGGACCTCCGCCACCTCCGCCCTTTGGTGCAAAAGGTGCAAATGTTGGAGTTGATCCAAGAGGGAGAGGACGTGGGTATGCGCGCCCTACAGGGGCTGCACCCCGTAAATCCTCTTTAAAGCCTTTGCATTGGAGCAAGGTTACAAGGGCACTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCACAAATTGCACCAGAGTTCGATTTTTCAGAGCTAGAGAAGCTTTTCTCCTTAAATGTTCCAAAACCTGCTGATGCTGGTGGAAAATCTGGAGGGAAGGGCAAGTCTGCTGGATCTAAAACTGACAGAGTCACCTTGGTTGATCTAAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCTTTGGACGAGTCAGTATTAGACGTTGATCAAGTGGAAAATCTTATTAAGTTTTGTCCTACAAAAGAGGAGATGGATCTTATAAAGGCATACACCGGTGACAAGGAACTTTTGGGGAAGTGTGAACAGATCTTGCAAGCAAGTGCCTTGAGAAAATCAGATCCTAAAAGCCTTGGAGAGTTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTTGCGTTCAAGATTCAGTTTGGTGCCCAGCTTACGGAATTTAAGAAGAGTTTAAACACTGTTAACTCTGCCTGTGAAGAGGTCCGACATTCTGCTAAACTGAAGGAGATAATGAAGAAAATACTTTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTCAAGTTAGATAGCCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTCTGCAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGACTAGAAAAAGTTAAACAAGAATTTGCTGCATCTGCAAGTGATGGACCTGTTTCCGCAGTTTTCCATGAGAAATTGAAAGAATTTATTGGTGTATCTGAGTCAGAGGTGGCATCTCTAACAAACCTATATTCTATAGTGGGTAGAAATGCTGATGCACTTGCCCTATATTTTGGTGAGGATCCTGCCCGTTGCCCTTTTGAGCAAGTTACTACAACCCTGCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAAAATTGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCCGAGAAAGAGGCTGAAATGGAAAAGGCTAAGGGCGAATGTACCCGAGCAAGGGGAATGCTTCCGAGATCAGTAAAGAAGTCTCTCCCTTTCAATGATGATGATGAAGATAATGTGGCAATTAGCCTTTCAAGCTGA 5457 0.4634 MLSVCSCRETEHNTEAKREKEKEKEKEKEKERRLFIGSRHPPLLLLSSASELSISEFYWPLIELETAPSDGAVQKVLLPEAAGSASGDFRESLWFAFSPFPSRLYFPIFYFFIDCSDTNYSGEGKIKHYVIHGVFDCCFSPDVLEEEEYRVYMGGIVAQLQDHFPDASFMVFNFREGERRSQISDIFSQYDMTVMEYPRQYEGCPVLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHILSPLNPQPSHLRYLQYISRRSLGAEWPPSETPLYLDCLILRVLPIFDDGKGCRPVVRVYGQDPSISATRSSKLLFSTSQSKKHVRHYLQAECMLVKIDLRCRVQGDVVLECIHLSDDFVHEELMFRVMFHTAFVRSNILMLSRDEIDILWEAKDLFPKDFKAEVLFLDADAVIPDLTTVTVSEDANEIESAETESASPDEFYEVEEIFSSVIDAQEGKTEYDSQAFHENAVNDETHKGVWRQKSDPHSFEDCPPDDKITKQVYKMDPGINTVKDISIDDAHYKFDGSIDSDPHAVKDIAVDDGEIKSTSIAVISDMMKPPLETKEVTMHVQQEFAVIENEYDEDKEVTEKELDSKAGNQMPDLTEQKSGKVLPSTAKKQPPSNSKPVGDTVAAKQKIKQQETHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALTNLSSTKEKIEDSKTRSLSAPVVSAVVASIDKTNDLKSRKVVTSKSSGYIAAEIDEKGLPSPLSSIKETSFQSDTPAQEQSLEQLLQPPPPPPPPPPAHSRVSSQVFESSSLKDDVSAQGSPSPVVSPSSLGGKGSLMPPPPPPPPPPPFQPSTLTAFMRPPETSLPFPPPPPPPPPPFFGQNVGSLVPFASPRKSVASSMVGETSVSLTLRTTPFPFTSTDVTLDVSQVGTAVIPSQPPPPPPPPRYEVSSVPSLTPLASPLPKNEIPSVPPPPMFPTASTNRAPPPPTPTPSIASHKGSPPPATPPPTQPLSQPPPPPPPPPPPPNSHIYSATPPIANSHVYSTTLPIPPPPPPPPFGKASLPPSPPPFNSPLPPPPPPPPPFSQAPPPPPPPPPTLPSPPLPLSTVASPPPPPMYKAAPPPPPPLPPSSGASPSPPPPPPLPPSNGAPPPPPPPLPPSSGAPPPPPPPLPPSSGAPPPPPPPMYGAPPTPSMYGTPPPPPSGRGPPPPPPPPGSQGPPPPPPPPMYGTPPPLPPPSYGAPPPGGRGPPPPPPPMFGAPPPLPGGRGPPPPPPPMFGAPPPPLGGRGPPPPPPPMFGAPPPPPGGRGPPPPPPPGGRGPPPPPPPGVPGAPTPPGGGPPPPPPFGAKGANVGVDPRGRGRGYARPTGAAPRKSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDFSELEKLFSLNVPKPADAGGKSGGKGKSAGSKTDRVTLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMDLIKAYTGDKELLGKCEQILQASALRKSDPKSLGELMKVPRVESKLRVFAFKIQFGAQLTEFKKSLNTVNSACEEVRHSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKIQLKSLAEEMQAIIKGLEKVKQEFAASASDGPVSAVFHEKLKEFIGVSESEVASLTNLYSIVGRNADALALYFGEDPARCPFEQVTTTLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGECTRARGMLPRSVKKSLPFNDDDEDNVAISLSS 1818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 638 670 - -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 860 880 - -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 621 670 - -
Vimu7g00821 1818 Pfam Formin Homology 2 Domain 1660 1756 IPR015425 -
Vimu7g00821 1818 Pfam Formin Homology 2 Domain 1397 1661 IPR015425 -
Vimu7g00821 1818 Coils Coil 1663 1683 - -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 10 31 - -
Vimu7g00821 1818 Pfam C2 domain of PTEN tumour-suppressor protein 308 445 IPR014020 -
Vimu7g00821 1818 Gene3D Formin, FH2 domain 1391 1768 IPR042201 -
Vimu7g00821 1818 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1392 1782 IPR015425 -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 960 976 - -
Vimu7g00821 1818 Gene3D Protein tyrosine phosphatase superfamily 128 313 IPR029021 -
Vimu7g00821 1818 SMART it6_source 751 1818 IPR015425 -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 923 959 - -
Vimu7g00821 1818 Coils Coil 1757 1793 - -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 767 1404 - -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 1798 1818 - -
Vimu7g00821 1818 Coils Coil 11 33 - -
Vimu7g00821 1818 Gene3D - 314 445 - -
Vimu7g00821 1818 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 309 445 IPR035892 -
Vimu7g00821 1818 ProSiteProfiles C2 tensin-type domain profile. 309 448 IPR014020 -
Vimu7g00821 1818 SMART PTEN_C2_2 307 447 IPR014020 -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 888 907 - -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 1 31 - -
Vimu7g00821 1818 PANTHER FORMIN-J 129 903 - -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 1072 1373 - -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 990 1057 - -
Vimu7g00821 1818 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1470 1786 - -
Vimu7g00821 1818 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 157 297 IPR029021 -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 810 825 - -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 788 809 - -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 1448 1469 - -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 827 855 - -
Vimu7g00821 1818 MobiDBLite consensus disorder prediction 621 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00821 Vimu-Chr7 8097801 8119243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00821 134 749 FH2 protein (formin) Gene Family AT5G07740 59.265 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00821 - - vun:114178199 1509.58