Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu7g00809 | ATGGAAACTGAAATAATCCAGGGACCTTGGGGATTTCGCTCTCTACCCAAATTCATATTGTGCACCATTTCTGGGGCCCTCACCGTGTGTTTTGCCATTGCTGGTGCCATGACAGGAGCCATAGCTGGTGCTTTAGCGGCTAAGGCTACAAGGAGCGGTCTTCTCCGGGGAGTTTCTTTGGGTGCCATTGCCGGGTCTATACTCTCAGTGGAGGTGTTGGAAGCTTCCCGTGCATACTGGTGTATGGAACAAACTGGCTCACGGGGAGCATCATCTATGGCAGATTTCATAGAGGAACTTGTTCGGGGGAGGCTTGTTGAGGAATCCCTTACACCAGCCATTTTAACTGCCTACAATTTGCAGTTTGAGCAGGTTGGCATTGCTAATGCAGGCTATGATGAGATTCATGATGTTCATGGCTTAGTGGCACCCAGAGGATTGTCAGGAGATTCACTCAAGAGGTTACCGCATCATATGATCTCAAAGGATATGAAGGCAGAAAATACTTGTACAATATGTTTGCAGGATATTGAAGTAGGCGAAATTGCAAGAAGCTTACCTCGCTGTCACCATACATTTCACTTGATATGTGTGGACAAATGGCTTGTCAAGAATGATTCCTGTCCTGTCTGTAGACAGAATGTGTAA | 648 | 0.466 | METEIIQGPWGFRSLPKFILCTISGALTVCFAIAGAMTGAIAGALAAKATRSGLLRGVSLGAIAGSILSVEVLEASRAYWCMEQTGSRGASSMADFIEELVRGRLVEESLTPAILTAYNLQFEQVGIANAGYDEIHDVHGLVAPRGLSGDSLKRLPHHMISKDMKAENTCTICLQDIEVGEIARSLPRCHHTFHLICVDKWLVKNDSCPVCRQNV | 215 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu7g00809 | 215 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 15 | 214 | IPR044523 | - | |
Vimu7g00809 | 215 | SUPERFAMILY | RING/U-box | 157 | 215 | - | - | |
Vimu7g00809 | 215 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 134 | 215 | IPR013083 | - | |
Vimu7g00809 | 215 | ProSiteProfiles | Zinc finger RING-type profile. | 170 | 212 | IPR001841 | - | |
Vimu7g00809 | 215 | Pfam | Ring finger domain | 168 | 212 | IPR001841 | - | |
Vimu7g00809 | 215 | SMART | ring_2 | 170 | 211 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu7g00809 | Vimu-Chr7 | 8034950 | 8039202 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu7g00809 | 14 | 215 | C3H Transcription Factor Family | AT1G74410 | 55.882 | 1.82e-74 | 223 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu7g00809 | - | - | gmx:100800105 | 394.815 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu7g00809 | 7 | 8034950 | 8039202 | Vimu7g00809 | 7 | 8034950 | 8039202 | ECH |