LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g00782	TTGAGAAGCAGCAAGAGAAGAGCCATGGTGCACGTTTCCTTCTACCGCAACTATGGGAAAACCTTCAAGAAGCCTCGTCGTCCATACGAAAAGGAACGTTTGGACGCCGAGTTGAAGCTGGTTGGAGAGTACGGGCTTCGCTGCAAGAGGGAGTTGTGGAGGGTTCAGTACGCCCTCAGCCGTATCCGTAACAATGCCAGGAATCTGTTGACACTGGATGAGAAGAACCCACGCCGAATTTTCGAGGGTGAAGCGCTTCTCCGAAGAATGTTCCGTTACGGACTTCTCGACGAGACGCAGAACAAGCTCGATTACGTGTTGGCCCTCACCGTCGAGAACTTTCTCGAACGCCGCCTCCAAACCCTCGTTTTCAAGTCTGGCATGGCCAAGTCCATTCATCACGCCAGAGTCCTCATCAGGCAGAGGCACATCAGGGTTGGGAGACAGGTGGTGAACATTCCATCATTCATGGTTAGGGTTGATTCTCAGAAGCACATTGACTTCTCACTCACGAGTCCACTTGGTGGTGGTCGTCCTGGACGCGTGAAGAGAAGGAACCAAAAGGCTGCTGCTAAAAAGGCCGCTGGTGGAGATGGAGACGAGGAGGATGAAGATTAG	618	0.5259	MRSSKRRAMVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARNLLTLDEKNPRRIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRRNQKAAAKKAAGGDGDEEDED	205

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Vimu7g00782	205	ProSitePatterns	Ribosomal protein S4 signature.	115	139	IPR018079	GO:0019843
Vimu7g00782	205	FunFam	40S ribosomal protein S9	116	196	-	-
Vimu7g00782	205	NCBIfam	30S ribosomal protein S4	19	174	IPR005710	GO:0003735\|GO:0006412\|GO:0015935
Vimu7g00782	205	MobiDBLite	consensus disorder prediction	169	205	-	-
Vimu7g00782	205	Pfam	S4 domain	117	160	IPR002942	GO:0003723
Vimu7g00782	205	CDD	S4	117	161	-	-
Vimu7g00782	205	Gene3D	-	116	173	IPR036986	GO:0003723
Vimu7g00782	205	PANTHER	30S 40S RIBOSOMAL PROTEIN	15	192	IPR022801	GO:0003735\|GO:0015935\|GO:0019843
Vimu7g00782	205	SMART	Ribosomal_S4_2	16	116	IPR001912	GO:0019843
Vimu7g00782	205	SUPERFAMILY	Alpha-L RNA-binding motif	20	167	-	-

Showing 1 to 10 of 13 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu7g00782	Vimu-Chr7	7792706	7793849	Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu7g00782	9	195	Cytoplasmic Ribosomal Protein Gene Family	AT5G39850	91.979	3.70e-127	355

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu7g00782	K02997		-	gmx:100305663	358.607

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu7g00782	7	7792706	7793849	Vimu10g01016	10	9384317	9386187	ECH
	Vimu7g00782	7	7792706	7793849	Vimu7g00782	7	7792706	7793849	ECH

Showing 1 to 2 of 2 entries