Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00775 ATGGCAAATTCTGCTTCTGCTAGCTTCTTCACTCAAGCAAAAGCGCTTCTTCTTAAGAACATTACCTTCCAGAAACGGAATGTGAAAACCAACGTTCGGCTGATTCTGTTCCCGGTGGTGCTATGCGTGTTGCTTTTCATGCTCCAACTCTTATTGGACACGCAATTGGATAAAAGCAAATTCAAATGCGGCTGCATGTGTGCCGACAACAGAACCAAAATCTCTCAGTGCCCTGACTCAGAGAAGCGGTGCGGGGTCCAGTATTCCGATTTCTTTCAAGCCCCCATGTGCGCCATTCCCAACCCCGTGGAATGGCCACCGCTCTTGCAACTTCCTGCTCCACCGAACCGGGCCGTGCGAACCGGTTTTCTTCCCTTTTTCGATCTGCCCGATGCATCGTGCAGGAGAACCGACTCGTGTCCTCTTTCTTTGCTCTTCACCGGAGAGAATCACTCCTTTGCGCTGAGCGTATCTGAGAAGATGTTTCGAAGTACCCTGAGTATAAGTGATTTTGGTAGTAATTTCCTTGCTGGTTTGGCCGTGAATGTACTGGGATCTGAATCAGAACCTGAAAGGAACAATTTTATTGAACCTGCTTTCTCTTCGGATCTCCCCATTTATTATTTACAAACGAACTGCTCAGGAACAGAGAACTCTGGATTCTCCTTTCCCTCGCCGACAGGAGCAAACAATGAGATTAAATGTGCTCTGGCTAAAAATTTATGGCGTAATAGTTCTACTGATATCAACAGTGAGCTGTACAAAGGTTATCAAAGAGGTAACTCAGAGGGACAAGTCAATGAGATAGTTTCAGCTTTTGATTTTCTAAATTCAAATGGTAATAGATATAATGTCGGTATATGGTACAACTCAACCTACCGTCAGGACGCAGGATTTACTGCCAATGCATTGTTGCGGATTCCTCGCTCTGTAAATCTGATTTCCAATTCCTTCCTGCAGTTTCTGCTTGGACCTGGAACCAAAATAATTTTGGAGTTTGTAAAGGAAATGCCAAAACCTGAGACCATTTTTAGGTTTGACATATCTTCTATGGTGGGCCCTCTGTTCTTTACATGGGTCATCTTGCAACTTTTTCCTGTCATTTTGACATCACTAGTATATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCACGGTCTTGGTGATAGGCCATATTGGATGATTTCATATGGTTATTTTCTTGTCACATCAGTAATTTACATGTTGTGCTTTGTGATATTTGGCTCACTCTTAGGTAAGAATATAACTATTGAATTTATTCCTCTTCGGATTTACCCATTTTCTTTAATGCTTTTGACTTTATTCTCAGGATTAAAAATCTTCACAGTCAATGACTACAGCATCCAATTTGTATTTTATTTTATCTATATAAACTTACAAATTGCGCTAGCATTTTTGGTGGCTACCATGTTTTCAAATGTCAAGACTGCAACAGTAACTGCATATATAGGTGTCTTTGGAACCGGGCTATTAGGTGGCTTTCTTTTCCGATTCTTGGTTGAAAATACATCATTTCCAAGTAAGTTAATGGTCGGAGGGTGGATAATTCTTATGGAGTTGTATCCTGGGTTTGCTTTACACCGTGGGTTATATGAGTTAGCACAATTTTCCATTCCAGGGAACAGAAGGGGGACTGATGGTATGAAGTGGCATAATCTGAGTGAAAGCACTAATGGCATTAAAGAGGTCTTAATTATCATGTTTGCTGAGTGGATTGTGATGCTTTTTGCTGCCTTCTACATTGATCAAGTTTTGTCGTCAGGAAGTAGAAAAGGTCCTCTTTTCTTATTGAAAGGATTTCAGAAAAAGTCTCCTTTCCAAAAGCTTGATACCCATATGCAGGTGTCAAAAGAATTATCTCAAATGGAGAAACCTGATGTCATCCAAGAGAAGGAGAAAGTGGAGGAGCTGCTACTTGAACCAACTATTAATCATGCAATTTTATGTGACGATCTAAGAAAAGTCTATCCAGGGAGGGATGGAAATCCAGATAAATTTGCAGTAAGAGGGTTGTTCCTTTCTGTGCCTCCTGGGGAATGCTTTGGTATGCTCGGTCCCAATGGAGCTGGGAAGACCTCTTTTATCAATATGATGATTGGTCTCACAAAACCAACCTCTGGTACGGCATTTGTTCAAGGCTTGGACATAAGAACTCAAATGGGTGGAATATATAGTACCATGGGTGTATGCCCACAACATGACTTGCTGTGGGACAGCTTGACAGGTAGAGAGCACCTACTTTTTTATGGCAGACTTAAAAATCTTAGAGGCTCAGTCCTAACACAAGCAGTAGAGGACTCTTTGAAGGGTTTAAACCTTTTTCACGGAGGAGTTGCCGATAAACAAGTTGGAAAGTACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGGGATCCCAAAATTGTTTACATGGATGAACCAAGTTCCGGATTAGACCCTGCCTCAAGAAAAATGTTATGGAGTGTTGTCAAGCATGCAAAACAGAACCGTGCAATCATTCTCACCACACATTCCATGGAAGAGGCAGAGGCCTTATGTGATCGATTGGGCATTTTTGTAAATGGCAGCTTGCAGTGTGTAGGAAATGCAAAAGAGCTTAAAGCAAGATATGGAGGAACTTACGTGTTGACAGTGACGACATCTTCAGAGCATGAAAAAGATGTGGAGAACATGGTGCAGAAACTCACCCCAAATGGCAATAAGATATACCATCTGTCGGGTACTCAGAAGTTTGAGCTGCCAAAAGAGGATGTTAGAATATCAGATGTGTTCCAAGCTGTTGATGTTGCAAAGAGAAAGTTCAGTGTTTCTGCATGGGGTTTAGTTGACACCACATTGGAAGATGTTTTCATTAAGGTAGCAAGACAGGCTCAGACATTTGATACCTTCTCATAA 2937 0.4154 MANSASASFFTQAKALLLKNITFQKRNVKTNVRLILFPVVLCVLLFMLQLLLDTQLDKSKFKCGCMCADNRTKISQCPDSEKRCGVQYSDFFQAPMCAIPNPVEWPPLLQLPAPPNRAVRTGFLPFFDLPDASCRRTDSCPLSLLFTGENHSFALSVSEKMFRSTLSISDFGSNFLAGLAVNVLGSESEPERNNFIEPAFSSDLPIYYLQTNCSGTENSGFSFPSPTGANNEIKCALAKNLWRNSSTDINSELYKGYQRGNSEGQVNEIVSAFDFLNSNGNRYNVGIWYNSTYRQDAGFTANALLRIPRSVNLISNSFLQFLLGPGTKIILEFVKEMPKPETIFRFDISSMVGPLFFTWVILQLFPVILTSLVYEKQQKLRIMMKMHGLGDRPYWMISYGYFLVTSVIYMLCFVIFGSLLGKNITIEFIPLRIYPFSLMLLTLFSGLKIFTVNDYSIQFVFYFIYINLQIALAFLVATMFSNVKTATVTAYIGVFGTGLLGGFLFRFLVENTSFPSKLMVGGWIILMELYPGFALHRGLYELAQFSIPGNRRGTDGMKWHNLSESTNGIKEVLIIMFAEWIVMLFAAFYIDQVLSSGSRKGPLFLLKGFQKKSPFQKLDTHMQVSKELSQMEKPDVIQEKEKVEELLLEPTINHAILCDDLRKVYPGRDGNPDKFAVRGLFLSVPPGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTQMGGIYSTMGVCPQHDLLWDSLTGREHLLFYGRLKNLRGSVLTQAVEDSLKGLNLFHGGVADKQVGKYSGGMKRRLSVAISLIGDPKIVYMDEPSSGLDPASRKMLWSVVKHAKQNRAIILTTHSMEEAEALCDRLGIFVNGSLQCVGNAKELKARYGGTYVLTVTTSSEHEKDVENMVQKLTPNGNKIYHLSGTQKFELPKEDVRISDVFQAVDVAKRKFSVSAWGLVDTTLEDVFIKVARQAQTFDTFS 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00775 978 ProSitePatterns ABC transporters family signature. 795 809 IPR017871 GO:0005524|GO:0016887
Vimu7g00775 978 SMART AAA_5 686 870 IPR003593 GO:0016887
Vimu7g00775 978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 888 IPR027417 -
Vimu7g00775 978 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 656 893 IPR003439 GO:0005524
Vimu7g00775 978 Pfam ABC-2 family transporter protein 262 589 IPR013525 GO:0016020|GO:0140359
Vimu7g00775 978 FunFam ABC transporter A family member 7 645 921 - -
Vimu7g00775 978 Gene3D - 648 921 IPR027417 -
Vimu7g00775 978 Pfam ABC transporter 681 822 IPR003439 GO:0005524
Vimu7g00775 978 CDD ABC_subfamily_A 660 881 - -
Vimu7g00775 978 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 631 972 IPR026082 GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00775 Vimu-Chr7 7724995 7748309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00775 665 904 Calmodulin-binding Proteins AT2G36910 24.506 2.46e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00775 - - vra:106769009 1866.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00775 7 7724995 7748309 Vimu7g00775 7 7724995 7748309 ECH