Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00769 ATGGAGCTTGCTTCCGATAGATCTGGTGACCTCAAGGAAGAAAACAGAACTCATGAGTATACTGTTGGTGATGATGAAGATGGTCCTCGTAGACAAGAAATTATTCTAGAGGCACCACCCATAGAGGAGGCTGGACCTAGCACATCAGCAGAGAAAAAGGAAGAGGTTGATGATGAACTTGAGAGCACGAAAAGTGAAATGGGTGTGGTGAGAGAAGAAAATGAACGGTTAAAGAGGTCTCTGCAGAAAATAATGAATGAGTATCAGACACTGGAAATGCAATTTCAAGACATAGTTAAACAAGGGACAAAAAGGAAAAATGGTAAGGAAGAAGGCACAGTAGAGGAATCGGATCTAGTTTCTCTGAGGCTAGGAAGAGTTCCAAGCAATCAAAGGAACGAAGAGAAAATAAAGGTTTATAAGGCATTGAAGGATGATGAAGGGTTTAACCAAGAGTTGACTCTTGGACTAGAGTGCAAATCAAAGTCAGGTAGCACATCTGAAGCTTTGCCTAATCCAAGCCCAGAAAACAGTTCTGAAATTCGAAAGGAAGAAGCTGGGGAGACACAGAAGGCAATTAGGGACACAGAGGATGAAGTTGCTCAGCAAAACCCTATGAAGAAGCCACGAGTTTGCGTTAGAGCAAGATGTGACACTCCAACAATGAATGATGGATGCCAATGGAGGAAATATGGACAGAAGATCGCAAAGGGAAATCCTTGCCCTCGAGCTTACTATCGTTGCACCATTGCACCATCATGTCCAGTCAGAAAACAGGTGCAAAGATGTGTCGATGACATGTCCATTTTGATTACGACGTATGAAGGGACCCACAACCACACTCTTCCACCTTCGGCTACTGCCATGGCATCCACAACTTCTGCAGCAGCCTCCATGCTTCTTTCTGGTTCATCAACCTCTCTCTCTGCCTCAGCACCGTCAACAACAGCACCCACTTCTGCTTCCAATCTCCACGGCCTCAATTTCTATCTATCAGATGGTGCAAAACCAAGGCAATTATACCTGTCAAACCCTGCACTGTCGTCTTCACCTTCACATCCAACCATCACTCTCGACCTCACTTCACACCCAGCTTCTTCTTCCTCGTCACCCTTCGTTAGATTCACTTCAAACTACAACCAACCCAGATACCCCTCTTCCTCAAGCCTAAGCTTCAGTAATTCCTCAGAAATCAACGCATTGTCTTGGAGCAATGGCTTCCTTACCAATAATAATACTATTCAACCTACATACAATAACAGGAACATACTTGGGAATGTAAACTTTGGGAGGCAACAAGTGGAAAATATATACCAATCCTATCTGCAAAAGAACAACAGCAATATTCCAAGCGTTCCTCAAGGTGGTGTACCGGCTGATACTATATCTGCAGCAACGAAAGTGATCACAGCAGACCCCACTTTTCAATCAGCTTTGGCAGCAGCGCTCACTTCGTTTATTGGTGGCGGTGTTCGAGGAAATCAAGGCGGTAACAGTGTTGGTGAAAATCCAAGTTCTGGTCAGAACTTGAAGTGGGGTGAGGTTTTTGCAGCGTCTAATAATTCAGCTTCTACCTTGTCTTGTTCAACTTCGAAAGTCAATGGTTGTGCATCGAGCTTCTTGAACAAAACGCCAGCGAATAATACACAGACGAAAAGTTTGGTGTTTCTACCGCCGTCGTCTTTGCCGTTTTCTACCCCCAAAAGTGCATCCGCGTCTGCATCTGCATCTCCTGCTGATAATAGCGACACCACCAATTAA 1761 0.4458 MELASDRSGDLKEENRTHEYTVGDDEDGPRRQEIILEAPPIEEAGPSTSAEKKEEVDDELESTKSEMGVVREENERLKRSLQKIMNEYQTLEMQFQDIVKQGTKRKNGKEEGTVEESDLVSLRLGRVPSNQRNEEKIKVYKALKDDEGFNQELTLGLECKSKSGSTSEALPNPSPENSSEIRKEEAGETQKAIRDTEDEVAQQNPMKKPRVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAPSCPVRKQVQRCVDDMSILITTYEGTHNHTLPPSATAMASTTSAAASMLLSGSSTSLSASAPSTTAPTSASNLHGLNFYLSDGAKPRQLYLSNPALSSSPSHPTITLDLTSHPASSSSSPFVRFTSNYNQPRYPSSSSLSFSNSSEINALSWSNGFLTNNNTIQPTYNNRNILGNVNFGRQQVENIYQSYLQKNNSNIPSVPQGGVPADTISAATKVITADPTFQSALAAALTSFIGGGVRGNQGGNSVGENPSSGQNLKWGEVFAASNNSASTLSCSTSKVNGCASSFLNKTPANNTQTKSLVFLPPSSLPFSTPKSASASASASPADNSDTTN 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00769 586 MobiDBLite consensus disorder prediction 1 37 - -
Vimu7g00769 586 ProSiteProfiles WRKY domain profile. 217 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu7g00769 586 MobiDBLite consensus disorder prediction 160 207 - -
Vimu7g00769 586 MobiDBLite consensus disorder prediction 178 204 - -
Vimu7g00769 586 MobiDBLite consensus disorder prediction 564 586 - -
Vimu7g00769 586 MobiDBLite consensus disorder prediction 352 371 - -
Vimu7g00769 586 Coils Coil 53 101 - -
Vimu7g00769 586 MobiDBLite consensus disorder prediction 1 73 - -
Vimu7g00769 586 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 47 501 IPR044810 GO:0003700
Vimu7g00769 586 MobiDBLite consensus disorder prediction 47 73 - -
Vimu7g00769 586 Pfam WRKY DNA -binding domain 223 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu7g00769 586 FunFam probable WRKY transcription factor 31 207 284 - -
Vimu7g00769 586 Gene3D WRKY domain 207 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vimu7g00769 586 MobiDBLite consensus disorder prediction 160 177 - -
Vimu7g00769 586 SUPERFAMILY WRKY DNA-binding domain 215 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vimu7g00769 586 SMART WRKY_cls 222 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00769 Vimu-Chr7 7679390 7683420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00769 28 492 WRKY Transcription Factor Family AT1G18860 40.150 7.58e-85 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vimu7g00769 WRKY 1.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00769 - - pvu:PHAVU_003G192000g 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00840 6 9298238 9300738 Vimu7g00769 7 7679390 7683420 ECH
Vimu7g03914 7 36665593 36668675 Vimu7g00769 7 7679390 7683420 ECH
Vimu7g00769 7 7679390 7683420 Vimu7g00769 7 7679390 7683420 ECH
Vimu7g03914 7 36665593 36668675 Vimu7g00769 7 7679390 7683420 PCT