Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00755 ATGTTTTTTCATCTGTTAGGTCTGACCTTGTTGGAAATAAAAAGTGCTTTGGATGATCCTAAGAATGCTCTGAGCAGCTGGCAAGAGTTTGATGAGACTCCTTGTAGATGGACCGGTATCGCTTGCCACCCTGGCGATGACCAAAGAGTTCGCTTAATAAATCTGCCATACATGCAGCTTGAAGGAATTTTATCTCCCAGCATTGGTAAACTCAGTGGACTACAAAGACTGGCACTTCATGAGAACAGCTTGCATGGAACCATTCCTAATGAACTTGCCAATTGTTCTGATCTAAGAGCACTGTACTTGAGGGGTAACTTTTTCCAAGGAGGCATACCGTCAAACATTGGAAATCTTTCATCTTTGAATATATTGGATTTATCGGGTAACTCATTGAAAGGTGCCATACCTTCCTCTATTGGCCGTCTCTCACAGTTGCAAATTCTGAACTTGACTACCAATTTCTTTTCTGGTGAAATTCCTGACATTGGAGTACTGAGCACCTTTAGCAAATACTCGTTTGAGGGAAATTCAGATCTTTGTGGGCGGCAAATCGAAAAGCCATGTCGGACATCACTTGGTTTTCCTGTGGTGCTCCCCCATGCTGAAAGTGATCAAGCTGCAGTCCCTGCCAAAAGGTCTTCACGTTACATGAAGGTACTGTTAATTTATGCAATTGCACTTATGGGTGTCGCACTTGTCATGGTGCTTTCATTTCTGTGGACTCGTTTGATAACAAAGAAAGAACGAGCTGCAAAGAGATACACGGAAGTCAAGAAACAAGTTCATCCAATAGCAAGCGCAAAATTTATTACATTCCGTGGTAATCTGCGATACACATCGTTTCAGATCATAGAGAAGCTGGAGTCTCTAAATGAAGAGAATATATTAGGATCCGGAGGATATGGTACTGTTTACCTAATGGAGATGAATGATGGTGGTCTATTTGCTGTTAAACGGATTGATCGAGGTTGTGAAGTGTCCGATCAAGTGTTTGAAAGGGAACTCGAGATCTTGGGGAGGATCAAACACATAAATCTTGTAAATATGCGTGCTTACTGCAGGCTTGCTTCTTCAAGATTCCTTATCTATGAGTATGTGGTCTTAGGCAGCTTAGATGATGCCTTGAATGGTGCGATTCAAGCCAAAAATACTCAAGAAATCGTACTACCGAACTGGAGTGATCGCCTAAGGATAGCTCTTGGTACTGCCCGGGGTTTGGCTTACTTGCACCATGAATGCAGCCCAGAAATTGTTCACCGTAATATAAAATCTAGAAACATACTCCTTGCTGAATGCATGGACCCACATATATCCGATCTTGGCCTTGCAAAGCTTTTGGTCGATGAGGAGGAGGCACATGTTACCACAGTTGTAGCTGGCACATTTGGTTATTTGGCACCAGAGTTTCTACAAAGTGGAAGAGCAACTGTGAAGTCGGATGTGTATAGCTTTGGAGTTCTTTTACTCGAACTTGTAACTGGGAAGAGGCCAACAGATCCTTCTTTTGTGAAAAGAGGTTTAAATGTTGTTGGTTGGGTGAACGCATTACTGAGAGAGAACAAATTGAACGACGTGGTGGACAAAAGATGCAAAGGTGTAGATGCAGGAACCCTTAAAGTTATTCTTGAGCTAGCAGCAAGATGCACAGATGGAAATGCAGATGATCGTCCATCAATGAACGAGGTGTTACAGTTGCTGAAACAAGAGGTTATGCCTCTTACAATGGATTTTTATGAGTATGATTCAGATTCCTGA 1758 0.4232 MFFHLLGLTLLEIKSALDDPKNALSSWQEFDETPCRWTGIACHPGDDQRVRLINLPYMQLEGILSPSIGKLSGLQRLALHENSLHGTIPNELANCSDLRALYLRGNFFQGGIPSNIGNLSSLNILDLSGNSLKGAIPSSIGRLSQLQILNLTTNFFSGEIPDIGVLSTFSKYSFEGNSDLCGRQIEKPCRTSLGFPVVLPHAESDQAAVPAKRSSRYMKVLLIYAIALMGVALVMVLSFLWTRLITKKERAAKRYTEVKKQVHPIASAKFITFRGNLRYTSFQIIEKLESLNEENILGSGGYGTVYLMEMNDGGLFAVKRIDRGCEVSDQVFERELEILGRIKHINLVNMRAYCRLASSRFLIYEYVVLGSLDDALNGAIQAKNTQEIVLPNWSDRLRIALGTARGLAYLHHECSPEIVHRNIKSRNILLAECMDPHISDLGLAKLLVDEEEAHVTTVVAGTFGYLAPEFLQSGRATVKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWVNALLRENKLNDVVDKRCKGVDAGTLKVILELAARCTDGNADDRPSMNEVLQLLKQEVMPLTMDFYEYDSDS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00755 585 SUPERFAMILY L domain-like 9 170 - -
Vimu7g00755 585 ProSiteProfiles Protein kinase domain profile. 291 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g00755 585 CDD STKc_IRAK 297 569 - -
Vimu7g00755 585 Gene3D Phosphorylase Kinase; domain 1 250 366 - -
Vimu7g00755 585 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 6 166 - -
Vimu7g00755 585 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Vimu7g00755 585 SUPERFAMILY Protein kinase-like (PK-like) 274 567 IPR011009 -
Vimu7g00755 585 Gene3D Transferase(Phosphotransferase) domain 1 369 577 - -
Vimu7g00755 585 Pfam Protein kinase domain 293 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g00755 585 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 30 162 - -
Vimu7g00755 585 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 367 577 - -
Vimu7g00755 585 Gene3D Ribonuclease Inhibitor 7 191 IPR032675 -
Vimu7g00755 585 Pfam Leucine rich repeat N-terminal domain 8 42 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00755 Vimu-Chr7 7539776 7544159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00755 7 572 Receptor kinase-like Gene Family AT2G35620 46.113 1.37e-166 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Vimu7g00755 Pkinase 3.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00755 - - gmx:100803920 905.205