Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00747 ATGGGGGACAAGTCCCAAGTGCTGGAGGCTGTGTTGAAGGAAACTGTGGATTTGGAGAACATACCCATTGAGGAGGTTTTGGAGAATCTGAGATGCGGAAGGGAAGGTCTCAGCAGTGAAGCTGCTGAGGAGAGGCTTACCATTTTTGGTCACAACAAGCTTGAAGAGAAGAAAGAGAGCAAATTTTTGAAGTTTTTGGGATTTATGTGGAATCCTCTATCATGGGTTATGGAGGCTGCTGCTATAATGGCAATTGCGCTTGCAAATGGAGGGGTGAGTGGACTTAGCTTTTGGGACTTTGTATTGGTAATGAAGGGGAAAGCACCTGATTGGCAAGACTTTGTGGGTATTATTACCTTGCTTCTCATTAATTCAACCATCAGTTTCATCGAGGAGAACAATGCTGGTAATGCTGCAGCAGCTCTCATGGCTCGGCTAGCTCCAAAAGCAAAGGTTCTCCGAGATGGTAGGTGGAATGAGCAAGATGCTGCGGTCCTAGTTCCTGGTGACATAATCAGCATCAAGCTTGGAGATATTATTCCAGCAGATGCTCGGCTTCTTGAAGGGGATCCTTTGAAAATTGATCAATCCGCACTTACAGGTGAATCACTTCCAGTGACAAAGGGTCCTGGTGATGGAGTATACTCTGGTTCAACCTGCAAACAGGGAGAGATTGAAGCTGTGGTCATTGCTACTGGTGTTCATACATTCTTTGGGAAAGCTGCTCATCTTGTTGATACAACAAATCAAGTGGGTCACTTTCAAAAGGTCTTAACTGCAATTGGGAACTTCTGCATATGTTCAATTGCTGTGGGGATGGTTATTGAGATCGTTGTTATGTATCCCATCCAAGATAGACCCTATCGTCCTGGAATTGATAACCTCCTTGTACTTCTGATCGGAGGAATTCCAATTGCCATGCCCACGGTTTTGTCTGTGACCATGGCCATTGGTTCTCACAGGCTATCTCAGCAGGGGGCTATCACAAAGAGGATGACAGCCATTGAAGAAATGGCAGGCATGGATGTGCTTTGCAGTGATAAGACTGGGACCCTGACATTGAATAAGCTTACTGTTGACAAAAATCTAGTTGAGGTTTTTGCAAAGGGAGTGGATCCAGATACTGTTATTTTGATGGCTGCCCGAGCTTCGAGGCTTGAGAATCAAGATGCAATTGATACAGCCATAGTTGGTATGTTAGCTGATCCAAAGGAGGCACGCGCTGGTATACAAGAAGTACATTTTCTTCCTTTCAATCCTACTGACAAGCGGACTGCATTGACTTATCTTGATCAAGATGGTAAAATGCACAGAGTAAGCAAAGGTGCACCAGAACAGATCCTGAATCTTGCACACAATAAGGCAGAGATTGAACGTAGAGTTCATTCAGTGATAGACAAGTTTGCAGAGCGTGGTTTACGATCTCTTGCTGTAGCATACCAAGAAGTTCCAGATGGAAGGAAAGAGAGTGCTGGAGGTCCATGGCAATTTGTTGGCCTTTTGTCTCTCTTTGACCCACCAAGGCATGATAGTGCGGAAACAATACGGAGGGCACTAAACCTTGGAGTAAATGTCAAAATGATTACAGGGGATCAGCTAGCTATAGGAAAGGAAACAGGTCGTCGCTTGGGAATGGGTACCAATATGTATCCTTCATCAGCTTTGCTTGGGCAGGACAAGGATGAATCAATTGCTGCCTTACCAATTGATGAGCTAATAGAAAAGGCTGATGGATTTGCTGGTGTATTTCCTGAGCACAAGTATGAGATTGTGAAACGCTTGCAAGCTAGGAAACACATTTGTGGAATGACCGGTGATGGAGTGAATGATGCACCTGCTCTCAAGAAGGCAGACATTGGTATAGCTGTTGCTGATGCTACTGATGCAGCTCGTAGTGCATCTGATATAGTTCTAACAGAACCGGGCCTTAGTGTTATTATTAGTGCTGTTTTGACCAGCCGAGCTATCTTTCAGAGAATGAAAAATTATACGCTTGGTTTCATGTTGCTGGCTCTTATATGGAAGTTTGACTTTCCACCCTTTATGGTGCTTATTATTGCCATCCTAAACGATGGAACTATTATGACAATTTCAAAAGATCGTGTAAAACCATCTCCTCTGCCAGATAGCTGGAAGCTAGCTGAGATATTTACTACTGGTGTTGTGCTTGGAAGTTACTTGGCGATGATGACAGTCATATTCTTTTGGGCAGCATACAAAACAGATTTTTTCCCACGAGTTTTTGGAGTCGCAACTCTTGAAAAAACTGCTCATGACGATTTTAGAAAACTTGCGTCTGCAATCTATCTTCAAGTGAGCACTATTAGTCAGGCTCTTATATTTGTAACTCGATCACGAGGTTGGTCATATGTTGAGCGTCCTGGTTTATTGCTGGTGGTTGCTTTTATAATTGCTCAGCTGATTGCCACTTTGATTGCAGTATATGCTAGCTGGAGCTTTGCTGCAATTGAAGGAATAGGTTGGGGATGGGCTGGTGTTATATGGGCATGGGATCTTGTGATTGAGCAAAGGGTGAGCAGAGCTTGTTTTGTTGTGTTGATTAATTCAAGGCTGGTTTTAGTTCTTGCTATTGCATTCACAAGGCAAAAGGACTTTGGAAAGGAACAGCGTGAACTTCAATGGGCACATGCTCAAAGAACATTGCATGGTCTACAACCACCTGACAGCAAGTTCACTGAGCGCATACACGTCAATGAACTCAATCAAATGGCCGAAGAAGCTAAAAGGAGAGCTGAAATTGCCAGGTAA 2769 0.4381 MGDKSQVLEAVLKETVDLENIPIEEVLENLRCGREGLSSEAAEERLTIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGVSGLSFWDFVLVMKGKAPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWNEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMVIEIVVMYPIQDRPYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDPDTVILMAARASRLENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYLDQDGKMHRVSKGAPEQILNLAHNKAEIERRVHSVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGLLLVVAFIIAQLIATLIAVYASWSFAAIEGIGWGWAGVIWAWDLVIEQRVSRACFVVLINSRLVLVLAIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDSKFTERIHVNELNQMAEEAKRRAEIAR 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00747 922 FunFam Plasma membrane ATPase 148 232 - -
Vimu7g00747 922 PRINTS H+-transporting ATPase (proton pump) signature 604 620 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu7g00747 922 PRINTS H+-transporting ATPase (proton pump) signature 461 479 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu7g00747 922 PRINTS H+-transporting ATPase (proton pump) signature 769 790 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu7g00747 922 PRINTS H+-transporting ATPase (proton pump) signature 635 660 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu7g00747 922 PRINTS H+-transporting ATPase (proton pump) signature 576 592 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu7g00747 922 PANTHER CALCIUM-TRANSPORTING ATPASE 19 887 - -
Vimu7g00747 922 Gene3D - 148 232 - -
Vimu7g00747 922 CDD P-type_ATPase_H 36 841 IPR006534 GO:0008553|GO:0016020|GO:0120029
Vimu7g00747 922 FunFam ATPase 4 plasma membrane-type 589 824 - -
Vimu7g00747 922 FunFam Plasma membrane ATPase 496 652 - -
Vimu7g00747 922 NCBIfam plasma-membrane proton-efflux P-type ATPase 36 815 IPR006534 GO:0008553|GO:0016020|GO:0120029
Vimu7g00747 922 Gene3D - 342 641 IPR023214 -
Vimu7g00747 922 FunFam Plasma membrane ATPase 357 504 - -
Vimu7g00747 922 Pfam haloacid dehalogenase-like hydrolase 341 618 - -
Vimu7g00747 922 NCBIfam HAD-IC family P-type ATPase 117 379 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu7g00747 922 NCBIfam HAD-IC family P-type ATPase 579 676 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu7g00747 922 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Vimu7g00747 922 SUPERFAMILY HAD-like 341 651 IPR036412 -
Vimu7g00747 922 PRINTS P-type cation-transporting ATPase superfamily signature 499 510 - -
Vimu7g00747 922 PRINTS P-type cation-transporting ATPase superfamily signature 627 639 - -
Vimu7g00747 922 PRINTS P-type cation-transporting ATPase superfamily signature 521 531 - -
Vimu7g00747 922 PRINTS P-type cation-transporting ATPase superfamily signature 195 209 - -
Vimu7g00747 922 PRINTS P-type cation-transporting ATPase superfamily signature 604 623 - -
Vimu7g00747 922 PRINTS P-type cation-transporting ATPase superfamily signature 345 359 - -
Vimu7g00747 922 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Vimu7g00747 922 Gene3D - 357 504 IPR023299 GO:0000166
Vimu7g00747 922 Coils Coil 904 922 - -
Vimu7g00747 922 Pfam E1-E2 ATPase 146 324 - -
Vimu7g00747 922 SFLD p-type atpase 327 655 IPR044492 -
Vimu7g00747 922 Gene3D - 110 824 - -
Vimu7g00747 922 SFLD Haloacid Dehalogenase 327 655 - -
Vimu7g00747 922 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 840 IPR023298 -
Vimu7g00747 922 SUPERFAMILY Calcium ATPase, transduction domain A 148 245 IPR008250 -
Vimu7g00747 922 ProSitePatterns E1-E2 ATPases phosphorylation site. 347 353 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00747 Vimu-Chr7 7484340 7489740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00747 1 922 Primary Pumps ATPases AT5G62670 87.646 0.0 1622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00747 K01535 - gmx:100819324 1591.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00747 7 7484340 7489740 Vimu7g00747 7 7484340 7489740 ECH