Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00743 ATGACCCTTAAGGGTGCCACAACTCAAGCCTGTGCGGCATGCAAACATCAGAGGAGAAAGTGCACTTCTGAATGCCTTCTTGCACCCTACTTCCCCGCAGACCAACCCAAGGTTTTTCTCAATGTCCACAGGCTTTTTGGAGTCAGCAACATCGTTAAGATATTGAAGATTTTGGAGCCTAACCAGAAGAAAATAGCCATGGACTCTATCATTATTCAAGCTAATTATAGAGATAAGTACCCTGTGCATGGCTGTTGGGAAGAGATTTGTAGGTTACAATACCAAATATGGCTTGCAGAAGAAGAGCTTCATGCAGTTTATCAACAGCTTCAAATATGTAGGCAGCAACCAAACAATAATGTTACTTCACAATTAGAATTGGGCATGACACCATGTACTAACAATAATGCACTCCCATTGTTTAATCATCATACTCCACAACCAAACACTTACAACAATAATGTCACTGCATTCTCTGTGTCACAGCAACATTCCTATTCCAACAGTAACAGTATGGATTATAGCTCCCTCTACTTAGATTCCAAGGATAATGCCATTAATCCTTTGTGGGTTGATCAGTACCCCTGTTCAAATAATGACAATTCTGTAGGAATGCTTTCTTCACAGCCATTGCCCATTCAACAAAATGTTGTTGAGGATTATGTTGACATGCCTCCCATTTTTGATTCACTTGATGATAGACAATCCTACATTTATTCCAAGGAAGCTTACGAGTCAAGTTCAGAGGAATCACTGAAAGACATAAGAAAGTGCACAGAGGATGTTTCTGAGAATGAATTGAAGTGTGCTGCTGCCTGCTTTAGCCTTACCAGTGTCAACTAA 843 0.4033 MTLKGATTQACAACKHQRRKCTSECLLAPYFPADQPKVFLNVHRLFGVSNIVKILKILEPNQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQYQIWLAEEELHAVYQQLQICRQQPNNNVTSQLELGMTPCTNNNALPLFNHHTPQPNTYNNNVTAFSVSQQHSYSNSNSMDYSSLYLDSKDNAINPLWVDQYPCSNNDNSVGMLSSQPLPIQQNVVEDYVDMPPIFDSLDDRQSYIYSKEAYESSSEESLKDIRKCTEDVSENELKCAAACFSLTSVN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00743 280 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Vimu7g00743 280 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Vimu7g00743 280 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00743 Vimu-Chr7 7428823 7430162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00743 1 114 AS2 family AT3G47870 64.035 2.36e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vimu7g00743 LOB 9.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00743 - - lang:109357116 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00743 7 7428823 7430162 Vimu7g00743 7 7428823 7430162 ECH