Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00731 ATGGTGTCAACACACGAGAAGAAGACGAACCTCGCCAGACTCATCATCCCTTCTTCTTCATCTTCCCCATCCCCATCTCCATCCATCACAAGCCCACATGTCATTCACAGTAGGTCCCACTCCTTTGTGGGTCCCTCCCCTCGCTTCAATCCCTCCTCAACCCCTCTCTTCTTCCTCCAAGAGGACGACGACGAAGACGAAGAAAAGGAACCTCTTTCTTCTGACCCTGTCAAGATTGGACCTTCCGATTTTCATATTCTCCGTGTTGTAGGGCAGGGTGCCTTTGGCAAGGTCTTTCTCGTCAGAAAAAAAGGAAATTGCTTCGATGGTGATGGTGATGGTGACGGCGATGGGGTCTTCGCCATGAAGGTCATGAGAAAGGACACCATCATAAAGAAAAACCACGTTGATTACATGAAAGCGGAGAGGGATATTCTCACTAAAGTCCTTCACCCTTTCATTGTTCAGCTACGTTACTCTTTTCAGACCAATTCTAAGTTATATTTGGTGTTGGATTTTGTAAACGGAGGGCATCTCTTCTTTCATCTGTATCGCCAGGGTATCTTCAGTGAGGATCAGGCAAGGCTTTACACTGCTGAGATAGTGTCCGCAGTTTCACATCTTCATAGCAAAGGCATCGTGCATCGGGATCTTAAGCCTGAAAACATTCTAATGGACTCTCATGGGCATGTCATGCTGACTGATTTTGGAATGTCAAAAGAGATTGATGAATTGGGAAGATCCAACTCTCTCTGTGGCACCGTGGAATATATGGCTCCTGAAATTCTTCTGGCTAAAGGCCATAACAAGGATGCGGATTGGTGGAGTGTTGGTATCCTGTTGTATGAAATGCTAACAGGGAAGGCACCATTTACACACACTAACAGAAAGAAACTTCAGGAGAAAATTATTAAAGAGAAAGTTAAACTTCCACCATTCCTTACCAGTGAAGCTCACTCATTACTCAAAGGATTGCTGCAAAAGGATCCAACAACAAGGTTAGGACATGGGCGAAATGGAGATGAGCAGATCAAAAGTCATAAATGGTTTAGGTCAATCAATTGGAAAAAATTGGAGGCAAGAGAACTGGAACCAAAGTTTAAACCAGATGTGTCTGGGAAAGACTGTACTGCTAATTTTGACAAATGTTGGACAGCAATGCCCCCTAATGACTCACCAGCATCCACACCTACAGCAGGTGACCATTTCCAGGGCTATACTTATGTGGCACCCAACCCTTGGCTTTCATCTGGTTCACTACAATGA 1266 0.4479 MVSTHEKKTNLARLIIPSSSSSPSPSPSITSPHVIHSRSHSFVGPSPRFNPSSTPLFFLQEDDDEDEEKEPLSSDPVKIGPSDFHILRVVGQGAFGKVFLVRKKGNCFDGDGDGDGDGVFAMKVMRKDTIIKKNHVDYMKAERDILTKVLHPFIVQLRYSFQTNSKLYLVLDFVNGGHLFFHLYRQGIFSEDQARLYTAEIVSAVSHLHSKGIVHRDLKPENILMDSHGHVMLTDFGMSKEIDELGRSNSLCGTVEYMAPEILLAKGHNKDADWWSVGILLYEMLTGKAPFTHTNRKKLQEKIIKEKVKLPPFLTSEAHSLLKGLLQKDPTTRLGHGRNGDEQIKSHKWFRSINWKKLEARELEPKFKPDVSGKDCTANFDKCWTAMPPNDSPASTPTAGDHFQGYTYVAPNPWLSSGSLQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00731 421 FunFam Non-specific serine/threonine protein kinase 174 369 - -
Vimu7g00731 421 ProSiteProfiles AGC-kinase C-terminal domain profile. 351 418 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vimu7g00731 421 SUPERFAMILY Protein kinase-like (PK-like) 69 395 IPR011009 -
Vimu7g00731 421 FunFam Non-specific serine/threonine protein kinase 82 196 - -
Vimu7g00731 421 Pfam Protein kinase domain 84 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g00731 421 SMART serkin_6 84 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g00731 421 Gene3D Phosphorylase Kinase; domain 1 82 393 - -
Vimu7g00731 421 ProSitePatterns Protein kinases ATP-binding region signature. 90 123 IPR017441 GO:0005524
Vimu7g00731 421 SMART pkinase_C_6 351 410 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vimu7g00731 421 ProSiteProfiles Protein kinase domain profile. 84 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g00731 421 PANTHER RIBOSOMAL PROTEIN S6 KINASE 60 412 - -
Vimu7g00731 421 MobiDBLite consensus disorder prediction 13 57 - -
Vimu7g00731 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Vimu7g00731 421 MobiDBLite consensus disorder prediction 1 57 - -
Vimu7g00731 421 Pfam Protein kinase C terminal domain 371 408 IPR017892 GO:0004674|GO:0005524|GO:0006468
Vimu7g00731 421 Gene3D Transferase(Phosphotransferase) domain 1 174 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00731 Vimu-Chr7 7304974 7308099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00731 16 411 AGC Kinase Gene Family AT3G08720 59.198 3.13e-175 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Vimu7g00731 Pkinase 2.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00731 K04688 - gmx:100798259 716.457