Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00721 ATGGCCATCACCGGTGAGATTTTCCGCCAGAACTTAACGGAATTTCTCGAGGAGTCTCTTTCTCCTTCGTCAGAGCTTCACGTTCTTGCCGTTGATGACAGCCTCGTTGATCGCCATGTCATCGAACGCCTGCTCAAGGTTTCTTCCTGCAAAGTGACGGTTGTGGAGAGTGGAAGGCGTGCTCTTCAGTATTTGGGGTTGGACGGAGAGACCGGTTCTCTCGGGTTGGATGTAAGCGAATTCTGGTACTTAGTTTGTGGCGTTGTTTTGACGTTGGTGAGTGCGAAGGTTAATCTCATAATGACGGATTACTCCATGCCGGGGATGACAGGATACGAATTACTCAAGAAAATCAAGCAGGAGTCTTCCATGTTTAGAGAGATTCCAGTGGTGATCATGTCGTCGGAGAATGTTTTGACTCGAATTGATAGGTGCCTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAACCTGTAAAATTGTCAGATGTAAGACGCTTGAAAGATTTCATCATGAAAGGGAAAGTGAAGGAAGTTGAAAAAAAATCTCTCAAAAGATCCACCATTGTCTGCAACATACTCACCCATCTCACTTCCATGCGATCCGTCACCATCATTGCTCTCACCATTATCCTCAAAGAATGCTAG 645 0.4605 MAITGEIFRQNLTEFLEESLSPSSELHVLAVDDSLVDRHVIERLLKVSSCKVTVVESGRRALQYLGLDGETGSLGLDVSEFWYLVCGVVLTLVSAKVNLIMTDYSMPGMTGYELLKKIKQESSMFREIPVVIMSSENVLTRIDRCLEEGAEEFLLKPVKLSDVRRLKDFIMKGKVKEVEKKSLKRSTIVCNILTHLTSMRSVTIIALTIILKEC 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00721 214 Gene3D - 26 206 - -
Vimu7g00721 214 CDD REC_typeA_ARR 28 166 - -
Vimu7g00721 214 SMART REC_2 26 167 IPR001789 GO:0000160
Vimu7g00721 214 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 174 IPR045279 GO:0009736
Vimu7g00721 214 Pfam Response regulator receiver domain 94 164 IPR001789 GO:0000160
Vimu7g00721 214 ProSiteProfiles Response regulatory domain profile. 27 171 IPR001789 GO:0000160
Vimu7g00721 214 SUPERFAMILY CheY-like 25 172 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00721 Vimu-Chr7 7224626 7226364 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00721 5 196 Response Regulator Gene Family AT3G48100 58.462 1.11e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vimu7g00721 Response_reg 5.1e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00721 K14492 - gmx:100796843 256.144