Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00706 ATGGGACTTGACTGGAATTCATTCTTAGGCATCCTTTTACTTGTTTTCAGGACATGTGGAAAAGAATTGCATACTACTGAATTAAGAAATTTGCAGCTGCAGTTTGAAAACAGCATTTCTCTGCCTGTCTTTACTGGAGGTCGGATTGAAGGAGAAGATGGTTCTAACCTAAGAATAAGTTTAGTTGATGGCCTAACTGGGGAGGTTGTCTGTACAGGACCTGAATCGATGGCTAAGGTAGAAATTGTAGTTCTTGAGGGCGATTTTGAAGAAGAAAGTGATATTTGGATGCCCGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGGAAAAAGCCCCTTCTTACAGGAGATGTAATTTTGTATCTTAAAGATGGTGTTGGTATGGTGGGTGAAATTTCATATACGGATAATTCAAGCTGGACAAGGAGCCGCAGGTTCAGGCTTGGAGCTAGAGTTGTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTTATTGTCAGAGATCACAGGGGAGAATGTGAGTATTTATATCTGTTTAGACGTATCAAGATCTTATGTTTGCAGATGCTATCAAAATTTACCTCTTAG 609 0.3974 MGLDWNSFLGILLLVFRTCGKELHTTELRNLQLQFENSISLPVFTGGRIEGEDGSNLRISLVDGLTGEVVCTGPESMAKVEIVVLEGDFEEESDIWMPEEFKSNIVREREGKKPLLTGDVILYLKDGVGMVGEISYTDNSSWTRSRRFRLGARVVDNFDGVRIREAKTESFIVRDHRGECEYLYLFRRIKILCLQMLSKFTS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00706 202 Pfam Calmodulin binding protein-like N-terminal domain 31 176 IPR046831 -
Vimu7g00706 202 PANTHER OS02G0177800 PROTEIN 26 180 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00706 Vimu-Chr7 7052287 7054354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00706 19 179 Calmodulin-binding Proteins AT5G62570 62.112 2.20e-68 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00706 - - gmx:100804548 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00706 7 7052287 7054354 Vimu7g00706 7 7052287 7054354 ECH