Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00685 ATGGCTGCTCGCAGACTTTCCTGGTTACTATCTCGGTCTCTCTCTTCTTCTTCTTCCCATTCTTCTGGAGCTGCTTTGTTTCACTCATTAGGAAGAAACTCCGGAGGGTGGAGAAACATCAATAGATTTAGCACGTCTGCAGCAGTTGAGGACCTAATCACTCCACAAGTTCCAATACGTTATACACAGCACCTGATAAATGGACGATTTGTGGATGCTGCATCAGGGAAAACGTTTCCAGCTTATGACCCGCGAACGGGAGAAGTGATTGCTAATGTTGCTGAAGGGGATGCTGAAGACATCAACCGTGCAGTATCAGCAGCTCGCAAGGCCTTTGATGAAGGGCCTTGGCCTAAAATGAGTGCATATGAAAGAAGTCGAATATTGCTTCGCTTTGCTGATTTGGTTGAGAAACACAACGATGAGCTAGCTGCTCTGGAGACATGGAACAATGGAAAGCCTTATGAACAGGCTGCCAAGTCAGAAGTTCCATTGTTTGTGCGTTTATTACATTATTATGCTGGTTGGGCGGATAAAATTCACGGGTTGACCGTCCCAGCTGATGGAGATTATCATGTTCAGACATTGCATGAACCAATTGGTGTAGCAGGACAAATTATACCTTGGAACTTTCCTTTAATTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAATACCATTGTCCTGAAGACTGCTGAGCAAACACCACTAACAGCTCTCTTTGTTGCAAAACTATTTCATGAGGCTGGTCTTCCGGAAGGTGTTCTGAATATAGTTTCTGGGTATGGTCCAACTGCTGGTGCAGCTCTTGCAAGTCATATGGACGTGGACAAGATTGGTAAACGTGTTAAGGGTTACAGTCTGCATCGTGTATTATATTTGAGTACAGACTGGTCTGAATCCCATGGAAATCTATTTCATAAGCTAGCATTTACTGGCTCGACAGATACTGGAAAAGTTGTACTTGAATTGGCTGCAAGAAGCAATCTTAAGCCAGTGACATTGGAGCTTGGAGGGAAATCACCTTTCATAGTGTTCGACGATGCTGATGTTGACAAGGCTGTTGAACTTGCACACTTTGCTCTGTTCTTTAATCAGGGTCAATGTTGTTGTGCCGGGTCTCGTACTTTTGTACATGAGCGTGTCTATGATGAGTTCTTGGAGAAATCAAAGAAACGAGCTTTGAGACGTGTTGTTGGAGATCCATTCAAGAAAGGTGTCGAACAAGGTCCTCAGATTGATGGAGAACAATTTGAGAAAGTCCTTAGGTACATAAAGTCTGGGATTGAAAGCAATGCTACCCTTGAATGTGGGGGGGATAGATTGGGCTCGAAAGGATTCTTTATCCAGCCAACTGTCTTCTCAAATGTCCAGGATGACATGTTGATAGCACAAGACGAAATCTTTGGCCCAGTTCAGTCCATCTTGAAATTCAAGGACACTGATGAAGTAATTGAACGGGCAAATAGAACACGTTATGGTCTAGCGGCAGGCGTGTTTACTAAGAACGTGGACACGGCCAACAAATTGATGCGGGCTCTGAGAGCTGGAACTGTGTGGATCAATTGCTTTGATGTTTTTGATGCTGCGATTCCTTTTGGTGGGTACAAGATGAGTGGTATTGGCAGGGAGAAAGGAATCTATAGTCTTCACAACTACCTCCAGGTGAAAGCTGTTGTCACACCTTTGAAGAATCCTGCTTGGATATAG 1719 0.4415 MAARRLSWLLSRSLSSSSSHSSGAALFHSLGRNSGGWRNINRFSTSAAVEDLITPQVPIRYTQHLINGRFVDAASGKTFPAYDPRTGEVIANVAEGDAEDINRAVSAARKAFDEGPWPKMSAYERSRILLRFADLVEKHNDELAALETWNNGKPYEQAAKSEVPLFVRLLHYYAGWADKIHGLTVPADGDYHVQTLHEPIGVAGQIIPWNFPLIMFAWKVGPALACGNTIVLKTAEQTPLTALFVAKLFHEAGLPEGVLNIVSGYGPTAGAALASHMDVDKIGKRVKGYSLHRVLYLSTDWSESHGNLFHKLAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIVFDDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKSKKRALRRVVGDPFKKGVEQGPQIDGEQFEKVLRYIKSGIESNATLECGGDRLGSKGFFIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDTDEVIERANRTRYGLAAGVFTKNVDTANKLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLKNPAWI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00685 572 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 366 377 IPR016160 GO:0016491
Vimu7g00685 572 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 76 562 IPR016162 GO:0016491
Vimu7g00685 572 CDD ALDH_F2BC 59 564 - -
Vimu7g00685 572 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 338 345 IPR029510 GO:0016491
Vimu7g00685 572 SUPERFAMILY ALDH-like 308 566 IPR016161 GO:0016491
Vimu7g00685 572 Pfam Aldehyde dehydrogenase family 70 282 IPR015590 GO:0016491
Vimu7g00685 572 Pfam Aldehyde dehydrogenase family 309 562 IPR015590 GO:0016491
Vimu7g00685 572 SUPERFAMILY ALDH-like 56 283 IPR016161 GO:0016491
Vimu7g00685 572 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 344 533 IPR016163 GO:0016620
Vimu7g00685 572 FunFam Mitochondrial aldehyde dehydrogenase 2 344 533 - -
Vimu7g00685 572 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 47 562 - -
Vimu7g00685 572 FunFam Aldehyde dehydrogenase, putative 534 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00685 Vimu-Chr7 6901841 6905707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00685 1 572 Aldehyde Dehydrogenase Gene Family AT3G48000 76.440 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00685 K00128 - qsa:O6P43_030889 936.791