Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00662 ATGTCCGCTAGATTTCTCAAATCTAGAAACCTTTCAGGACGCAATGTCCCACCGGGCGCCATGTCCGCTAGATTTCTCAAATCTAGAAACCTTTCAGACGCAATGTCCCACCGGGCGCCATGTCCGCTAGATTTCTCAAATCTAGAAACCTTACAGGACACAAAGTCCGACCGGCACAACATGCAATACGACAAATCCTTCGGTCATGAAGGAGCAAACCCCTCCCTTTCCCTCGGACTTGGGGGGATGATGTACGGTAGTATATCTCCAAAGTCCAACGGCCGGCCTTACAGGGCTAATAGCCCATCTCAGTACCTCCCCCTCCGGTCAAGACTTGAAGATCACCGGACGGTCGAAATCAACACAGAGGGTGCGGTTGAGATCCAGAAGAAGCAGACAGAAAGACGGCAAACAACGTCATCCAGAATGACCTCAAAGGGAGACTTGTGTGCTACAAACAAGATTGGACTAGTGGATTCCAAGCAGGCATCAGCAATTCCAGTGATCTCTTTCGGGGAGCAACTGGAGAGAAACACAGGTACAATTAAAACTTTTCTGGTTCAGTGTCCTTTCTGGAATTTTGGCGACCCTTTTCCTGAAAAAGTGCTTCATTGGTTATATTCTATAGATGGAACTCTAACTGCAGTGCAGACCCTTGCATCAACAGCACTATGTGGCATTATCCATTCAATCTTAGGAGGGCAGCCCCTCCTCATACTTGGTGTAGCGGAGCCAACAGTTCTGATGTATACATTTTTGTATGACTTTGCAAAGGATAGAAAAGATTTGGGACACAAACTATTCCTTCCTTGGACTGGATGGGTGTGTGTTTGGACTGCTGCGTTGCTCTTCTTGCTGGCTATTGTTGGTGCATGCTCCATAATCAACAGATTCACGCGCCTTGCAGGTGAACTATTTGGTCTGCTGATTGCAATGCTCTTCATGCAGCAGGCGATAAGGGGACTTGTGGAAGAGTTCGGTGTGCCCCAGTCCCAGGGAGAAGGTACCAATCAGATTGCACGCCAATCTTCTTGGCTGTTCGGAAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTTCTGTTTACTGCACTAAAAAGCCGTAAGGCTAGATCCTGGCGATACGGAGCAGGTAGTGGTTGGTTGCGGGGATTTGTGGCTGATTATGGAGTCCCACTAATGATTCTGGTGTGGACTGCTGTGTCTTATATGCCAACCAATAAGGTTCCAAGGGGAATCCCTAGGCGACTTTTCAGTCCAAATCCATGGTCTCCCGGTGCATACACAAATTGGACAGTAATTAAGCAGGAAATGTTGAATGTGCCTCTCATCTATATTATTGGAGCATTTATACCAGCGACTATGATTGCCGTGCTTTATTACTTTGATCACAGTGTCGCTTCACAACTTGCCCAGCAAAAGGAGTTCAATCTAAGAAAACCCTCATCATATCATTATGACCTTCTCCTCTTGGGTTTCTTGACCATTTTGTGTGGGCTTATTGGAATCCCTCCAGCCAACGGTGTGATTCCTCAATCTCCTATGCATACTAAAAGCTTAGCTACTCTAAAACATCAGCTGTTGCGTAAAAAAATTGTATCTGCCGCACGGAAAAGCATTCAGAAAAATATGAACCTGAATCAGCTATACCAAAGTATGCAAGAAGCATATGATCAAATGCAGACTCCGTTAGCCCACCAAATACCACCTGCCTTGGGGCTAAAGGAGATGGAGGAATCCACCATCCAACTGGCTCAAAGTCATGGATACATTGACACCCCTGTTGATGAGGTTGTATTCGATGTGGATAAAGATGTTGATGACCTTTTACCTGTTGAAGTAAAAGAGCAGCGCCTCAGCAATCTACTGCAGGCATTAATGGTTGCACTTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGCCTGCCCGGAAATCAGTTTTGGGAGAGAATATTATATCTTTTCACTGCTCCAAGTCGACGATACAAGTACATCTATGCTCAGTCAATTTTATCTTTTTCATGGTCCCAGGATTCATGGATATAA 2094 0.4542 MSARFLKSRNLSGRNVPPGAMSARFLKSRNLSDAMSHRAPCPLDFSNLETLQDTKSDRHNMQYDKSFGHEGANPSLSLGLGGMMYGSISPKSNGRPYRANSPSQYLPLRSRLEDHRTVEINTEGAVEIQKKQTERRQTTSSRMTSKGDLCATNKIGLVDSKQASAIPVISFGEQLERNTGTIKTFLVQCPFWNFGDPFPEKVLHWLYSIDGTLTAVQTLASTALCGIIHSILGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGHKLFLPWTGWVCVWTAALLFLLAIVGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPQSQGEGTNQIARQSSWLFGNGMFALVLSFGLLFTALKSRKARSWRYGAGSGWLRGFVADYGVPLMILVWTAVSYMPTNKVPRGIPRRLFSPNPWSPGAYTNWTVIKQEMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRKKIVSAARKSIQKNMNLNQLYQSMQEAYDQMQTPLAHQIPPALGLKEMEESTIQLAQSHGYIDTPVDEVVFDVDKDVDDLLPVEVKEQRLSNLLQALMVALCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKYIYAQSILSFSWSQDSWI 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00662 697 Pfam HCO3- transporter family 210 327 IPR011531 GO:0006820|GO:0016020
Vimu7g00662 697 Pfam HCO3- transporter family 351 525 IPR011531 GO:0006820|GO:0016020
Vimu7g00662 697 Pfam HCO3- transporter family 612 685 IPR011531 GO:0006820|GO:0016020
Vimu7g00662 697 PANTHER ANION EXCHANGE PROTEIN 163 683 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00662 Vimu-Chr7 6619286 6628089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00662 163 681 Antiporters AT2G47160 72.031 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00662 K24194 - gmx:100782542 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00662 7 6619286 6628089 Vimu7g00662 7 6619286 6628089 ECH
Vimu7g00662 7 6619286 6628089 Vimu10g01242 10 12442837 12447788 PCT