Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00659 ATGAATTGCGTTCTTGCGATCTACGAAATGCAGAGCATAGTTCTTTCTTTCTCCCCTTTGCTCTCTATCCGCAAACTTCACACCACTCTCTCTCCTTCCACTGCCAAACCCAACCGCATTCTCACTTTCTCTTCCTCTTTCTCTTCATTCCCATGTCAACGGTCTTCTCCTTCTTCTTTCAAACTTGCTCCCTCTCCTCGCTTGCTCCATGCCGGACCAACCTCCGTGCCGGAGGGCAGTGCCGCCGAGTTCTCTGGGGGCAACAGGCTGCTCAACATTCTCGAAATGGGTTCCCTGTTTGCGTTCTGGATCCTCTTCAACATCTACTTCAACATCTATAACAAACAGGTCTTGAAAGTTTACCATTTCCCTTTAACCGTTAGCACGATTCAGTTTGCCATTGGGACTCTCCTCGTGGCGTTCATGTGGGGTTTTAATCTCTACAAGAGGCCAAGACTCAGTGGCGCGCAGCTTGCAGCGATATGGCCACTGGCTCTGGTTCATACTTTAGGGAATCTTTTTACTAACATGAGTCTTGGGATGGTTGCTGTGTCTTTCACTCACACAATAAAAGCTATGGAGCCTTTTTTTTCAGTGCTCCTTTCTGCCATGTTTCTTGGAGAGAATCCTACTGCATGGGTGGTTGGTTCCCTTGTGCCTGTTGTTGGTGGGGTAGCGCTAGCATCTGCTACCGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTGACAAATCAATCTCGTAATGTTCTTAGCAAAAAGCTTATGGTTAACTCGGAGGAATCCATGGACAACATAACTCTCTTCTCAATTATAACAGTCATGTCCTTCTTGATATCAGCACCTCTAACTTTGTTAATAGAGGGTGTTAAATTTACCCCTACTTACCTGCAAACTTCTGGATTAAATGTTAACGAATTGTGCATCAGATCTCTTCTAGCTGCGCTATGTTACCATGCCTATCAGCAAGTTGCGTATATGATACTGCAGAAGGTGTCACCTGTTACCCACTCTGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATCGTGAGCTCAGTCATCTTCTTCCGAACTCCAGTATCACCAATTAACGCACTTGGCACTGCTATAGCTCTTGCTGGTGTTTTCCTGTATTCCAGGGTGAAGCGACTCAAGTCAAAGACGATCTAG 1185 0.4591 MNCVLAIYEMQSIVLSFSPLLSIRKLHTTLSPSTAKPNRILTFSSSFSSFPCQRSSPSSFKLAPSPRLLHAGPTSVPEGSAAEFSGGNRLLNILEMGSLFAFWILFNIYFNIYNKQVLKVYHFPLTVSTIQFAIGTLLVAFMWGFNLYKRPRLSGAQLAAIWPLALVHTLGNLFTNMSLGMVAVSFTHTIKAMEPFFSVLLSAMFLGENPTAWVVGSLVPVVGGVALASATEASFNWAGFWSAMASNLTNQSRNVLSKKLMVNSEESMDNITLFSIITVMSFLISAPLTLLIEGVKFTPTYLQTSGLNVNELCIRSLLAALCYHAYQQVAYMILQKVSPVTHSVGNCVKRVVVIVSSVIFFRTPVSPINALGTAIALAGVFLYSRVKRLKSKTI 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00659 394 Pfam Triose-phosphate Transporter family 95 384 IPR004853 -
Vimu7g00659 394 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 94 392 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vimu7g00659 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 313 387 - -
Vimu7g00659 394 PANTHER SOLUTE CARRIER FAMILY 35 96 388 - -
Vimu7g00659 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00659 Vimu-Chr7 6599268 6601890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00659 19 392 Antiporters AT5G33320 63.959 2.67e-165 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00659 K15283 - gmx:100780925 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00659 7 6599268 6601890 Vimu10g01257 10 12672174 12675735 ECH
Vimu7g00659 7 6599268 6601890 Vimu7g00659 7 6599268 6601890 ECH
Vimu7g00659 7 6599268 6601890 Vimu10g01257 10 12672174 12675735 PCT