Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00651 ATGGTGCAATTTTTTAACGTTCCTGAAAACCTTATTAACTGGCTATGCTTAATGTTGCTGTCGTCGTCGATGTTAGTCCCACGTGCGGGCTGCTCCGGCACGGGTATACGCGAAACGGGTCTCACGTGCGGGGATTATGAGAACCCCGAGTCTTCTGCGTCCAACTTCATGGCCATAATGGACATGGTGTCGTTTCAGGTTAAAGAGCGAGGGTGGGGAGCGCAGACGCTGCTGGGTTCTGGGCCTCCCATGTACGCATTGGCCCAATGCCGGCGCGACCTGAGGCCAGCAGACTGCTACATGTGTTTCAGCCAAGCGAGGCTGGTGTTGTCACGGTGCGTGCCCAAGGCAGCTGGCAGAATCTACCTCGACGGCTGCTTCCTCCGATACGATGACTACTCCTTTATCCGTGAGAGCGTTGACCCCACTCATGACATCGGCATCTGCGTGAGCCCAACTGTGGGGAATGACACGGCCAGACGGGTGGCGGCGACGGTGTCGAACGTGACGGAGGAGGCAGTGGAACGTGGGTTCGCGGTGGACGGAGGGGATGGGATTTTCGCCCTGGCGCAGTGCTGGTCGACGCTGAACAAAGGGAGGTGCAAGATATGCTTGACCGAAGCGGCAAAGAAAGTGCAGGAATGTGTGCCGAATGGTGAGGGTAAGAGTCTATTCACTGGTTGCATTTTGAGGTATTCAAGGCACAAATTCTACAATGACGTTTCACCACCACCTAACATCAATGATTCTCCTACTTCTACAGAAGAAGGGCCTGGTGTCTGGACGATCGTTGCATTTGTATTATCGGTGATAGTAGGGATTTCACTCATCGTCCTTGCTGCATTTATGTGCTGTCATAGAATGTCGTCACGTAGAAAAGTAAGCGACAGTGGTGGTTTGGCACCTGATTTTGCCTTCGTAGCAGGCTTCAGTTTTAGGTACGATTTGCTTGAGAACGCCACAGATCATTTTGATCCCGCAAACAAATTAGGCCAAGGTGGAGCTGCTTCCGTGTTCAAAGGAACCCTCCCCACTGGGAAGACTGTTGCTGTTAAACGATTATCTTTTAATAAACAGCAATGGACAGAGGGGTTCTTCAATGAGGTCAATTTGATTAGTGGAATTCAACACAAGAATGTGGTGAAGCTTTTGGGGTGCAGCATCGAAGGCCCTGAAAGCCTGTTGGTTTATGAATTTGTGCCCAATGGAAGTCTTGATCAAGTCCTTTTCGGTGAGTTGTCCACTTTGAGCAATTCTAGTCCAAGCAGTAGCATGTTCATTTTATCTCTTGTTCAGGTGTGGAAGAATTACAAGGCAAATAATATAACAGCATCCGTTGATCCAGTTCTGCAAGGTAAACTTACGGTAGAAGAAGCATCAAATACGCTCCAAGCTGGCCTTCTTTGTACACAATCAACTGTTACTCTCAGACCATCCATGTCTGAAGTAGTTCAGATGCTAACCAAGAAAGACTACGCTATTCCCTCTCCAAAGCAACAACCATTCCTCAATTTCAGTGGGCTAAGTCAAAATGACCGCACTGTATCCTCAATTGGGCTTGCAAGTGCAAGGTCCTCCTTTCACAGCACCACCAGTTCACTAATTCCAAATGATGATTTATCAGTACAACGGAATTCCTCTTCTCGTTCTGACAAGTTCATTGCTGGCAGCCCTGATTCAAATATCCAATTAAATATAGGGGCACCTGAGCCTAGGTAG 1719 0.4875 MVQFFNVPENLINWLCLMLLSSSMLVPRAGCSGTGIRETGLTCGDYENPESSASNFMAIMDMVSFQVKERGWGAQTLLGSGPPMYALAQCRRDLRPADCYMCFSQARLVLSRCVPKAAGRIYLDGCFLRYDDYSFIRESVDPTHDIGICVSPTVGNDTARRVAATVSNVTEEAVERGFAVDGGDGIFALAQCWSTLNKGRCKICLTEAAKKVQECVPNGEGKSLFTGCILRYSRHKFYNDVSPPPNINDSPTSTEEGPGVWTIVAFVLSVIVGISLIVLAAFMCCHRMSSRRKVSDSGGLAPDFAFVAGFSFRYDLLENATDHFDPANKLGQGGAASVFKGTLPTGKTVAVKRLSFNKQQWTEGFFNEVNLISGIQHKNVVKLLGCSIEGPESLLVYEFVPNGSLDQVLFGELSTLSNSSPSSSMFILSLVQVWKNYKANNITASVDPVLQGKLTVEEASNTLQAGLLCTQSTVTLRPSMSEVVQMLTKKDYAIPSPKQQPFLNFSGLSQNDRTVSSIGLASARSSFHSTTSSLIPNDDLSVQRNSSSRSDKFIAGSPDSNIQLNIGAPEPR 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00651 572 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 430 513 - -
Vimu7g00651 572 Pfam Protein tyrosine and serine/threonine kinase 328 411 IPR001245 GO:0004672|GO:0006468
Vimu7g00651 572 Gene3D Transferase(Phosphotransferase) domain 1 406 504 - -
Vimu7g00651 572 Gene3D - 152 237 IPR038408 -
Vimu7g00651 572 Gene3D - 38 135 IPR038408 -
Vimu7g00651 572 Gene3D Phosphorylase Kinase; domain 1 301 399 - -
Vimu7g00651 572 FunFam Cysteine-rich receptor-like protein kinase 2 292 399 - -
Vimu7g00651 572 Pfam Salt stress response/antifungal 174 234 IPR002902 -
Vimu7g00651 572 Pfam Salt stress response/antifungal 75 133 IPR002902 -
Vimu7g00651 572 ProSiteProfiles Gnk2-homologous domain profile. 34 135 IPR002902 -
Vimu7g00651 572 ProSiteProfiles Gnk2-homologous domain profile. 140 237 IPR002902 -
Vimu7g00651 572 SUPERFAMILY Protein kinase-like (PK-like) 307 414 IPR011009 -
Vimu7g00651 572 MobiDBLite consensus disorder prediction 538 564 - -
Vimu7g00651 572 ProSiteProfiles Protein kinase domain profile. 324 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g00651 572 MobiDBLite consensus disorder prediction 538 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00651 Vimu-Chr7 6538447 6543590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00651 17 412 Receptor kinase-like Gene Family AT5G40380 43.951 3.30e-101 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vimu7g00651 PK_Tyr_Ser-Thr 2.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00651 - - gmx:100780384 554.673