Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00642 ATGGAAGTCCCCAAATCCCCTTCCAAATACAAACGAATCGCCAAACACAAATCGCTTATAAAATCCGGTTTAGTAATTTTGGTGATGCTGCTATTGTTTCTGGGTTTTTATCTCGAGTCAGAAACTGGAAAACTCAATGCGTCGTCGTATTACACCGTGGTTGTGGATTGTGGAAGCACTGGGACACGGGTGAATGTGTACGAGTGGATGGTAGGCGTGAAAGGAGCAAGCAAAGGGAACTTGCCAGTGTTGCTGCACTCCTATCCTGATAATACAACCAAGAGAAGTTCACTTTGGAAAGGTTCTTGTCAATATCACTGTATGCAAACTGAACCCGGGTTACACAACTTTGTTAATGATTCTTTAGGAGTGAGACAGGCTTTGGAGCCTTTGATTGTGTGGGCGGAGCAAGTGGTGCCGCGAGAAATGCGCGGCAGTACTCCTGCTTTTGTCTTGGCTACTGCTGGGTTGAGGGGGCTCGCCTTGGAGGACGCTGATAGGTTATTGGGAGATATTGAGGCTGTTGTGAAAGGCCATAGCTTTATGATGAGCAAGAGCTGGATAAGGGTTTTGAGTGGGAAGGAGGAAGCTTATTATGGCTGGGTGGCTTTGAACTACAAAATGGGCACCTTTGATGATAACTATCCCAAGTCTCCCGCTTTGGGACTTGTTGATATTGGGGGCTCGTCGTTGCAGATTGTGGCAGAGATAGATGTTGCTGTTGATAATGTGCATGCAATGAAATCAAGGCTCGGATCAACGGAGCATCAGATTATGGCATATTCATTGCCTGCGTTTGGTCTAAATGAAGCGTTTGATAGGACAGTTCTTAGGCTTAGAAACAATCAAAGTGAGGAAAGAACTGCCAGTATCTCTGACCTCAGACATCCTTGTCTGTTATCAACTTATGTACAAAACTATACATGCCATTCTTGCTCTGCAATGGCTTCCATTTATGAGAAAAAACACAGTCAAGACCAGGAAAGTGAGCTTTATTCTTTACGTCTTACTGGAGAACCTAATTGGGAACAATGCAGAGAACTGGCTATTGGTGCCGCCATGAACTCGAGTTCCAAAGTGTCACATCTGACAGTTAGCAAAAATTGCCAAGCTAGTTTATTTTCTGGTACTGGCACTGATATACTTAATTTAACAGCTGTTGCACAACCAGCCAAGTTTCATGCATTGTCTGGTTTCTTTTTTGTCTACAATAAGCTAAATTTGAGCCCAAGAACCAACTTAACAATGGTTTGGGAATCAGGCAAACAAATATGTTCAAATTTATGGTCTGGTTTGAGCAGTATTTCTGATAATCCAGATTATGCTGGACTATTTTGTTTCCAGGTGGCTTATATGGCATCATTGATTGATTATGGTCTCTGTCTTGGGGATGTTGAAATGGTATTTGGCCCAGGTGACATTTCGTGGACTTTAGGAGCTGCATTAATTGAAGGGAAATTTTTGTGGTTAAACAGTACAAGCTACGAAGCCCATGTTATTATTTCAACTTTAAAGAATGTCAAGGTCACGTCTTCTCCTACTGTTCTATTTGCTGTACTCGTATTACTTTTATTTATTGTTTATTGTAGTCAAATTAAGCTACCAATGCCAAGTAGAAGGGATTCTGCTCCTGGCTCATCTTTGCCATCTTATACTCTTGTAAGACGTCGATCTAACTAA 1680 0.4214 MEVPKSPSKYKRIAKHKSLIKSGLVILVMLLLFLGFYLESETGKLNASSYYTVVVDCGSTGTRVNVYEWMVGVKGASKGNLPVLLHSYPDNTTKRSSLWKGSCQYHCMQTEPGLHNFVNDSLGVRQALEPLIVWAEQVVPREMRGSTPAFVLATAGLRGLALEDADRLLGDIEAVVKGHSFMMSKSWIRVLSGKEEAYYGWVALNYKMGTFDDNYPKSPALGLVDIGGSSLQIVAEIDVAVDNVHAMKSRLGSTEHQIMAYSLPAFGLNEAFDRTVLRLRNNQSEERTASISDLRHPCLLSTYVQNYTCHSCSAMASIYEKKHSQDQESELYSLRLTGEPNWEQCRELAIGAAMNSSSKVSHLTVSKNCQASLFSGTGTDILNLTAVAQPAKFHALSGFFFVYNKLNLSPRTNLTMVWESGKQICSNLWSGLSSISDNPDYAGLFCFQVAYMASLIDYGLCLGDVEMVFGPGDISWTLGAALIEGKFLWLNSTSYEAHVIISTLKNVKVTSSPTVLFAVLVLLLFIVYCSQIKLPMPSRRDSAPGSSLPSYTLVRRRSN 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00642 559 Gene3D - 39 192 - -
Vimu7g00642 559 Pfam GDA1/CD39 (nucleoside phosphatase) family 46 484 IPR000407 GO:0016787
Vimu7g00642 559 Gene3D Exopolyphosphatase. Domain 2 193 468 - -
Vimu7g00642 559 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 22 485 IPR000407 GO:0016787
Vimu7g00642 559 MobiDBLite consensus disorder prediction 543 559 - -
Vimu7g00642 559 MobiDBLite consensus disorder prediction 536 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00642 Vimu-Chr7 6474158 6477218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00642 14 488 Nodulin-like Gene Family AT4G19180 34.420 2.49e-86 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00642 - - vun:114175521 1011.13