Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00622 ATGAAGTGGGCTCAAATAGCAGCACAGTTACCTGGGAGAACTGATAATGAGATTAAAAACTTCTGGAATTCATGTCTAAAGAAGAAGCTTCTGAAACAAGGGATTGACCCAAATACACACAAGCCTTTAACAGAAGGTCATGTTAAGGAAGAAAAGAAAATCACAGAGACAGCACCTATGCAAACACCACTGTCTCAAGGCCTTTCAGTTCCATTAACTTTCCCTTCATCACAGGGAACAACACTTCTAATTGATTCCAATTACTATGATGGAGGACTAACTGAAGCTTCAAGAGAAATGTTCTTGAACAAGCCAGCATTGGACCCGTTATCCTACTACGATTTTCCAATGGGTGCTGCACAGTCTGGTTTTAACTTACCCATGAGTCAGTATCATACAAGCCTTAAAGCATCTGATCAGAGTCCTTTTGGACCCAATTCAAGCTACGGATTCCTTTCATTGCCAAGTCTAACCAATTCTGATCATGGGAATGTGTCGGTGACGGAGTTTTCGGACAACAATTCAGCTTCCAAAATCAGTTCATTGCTCATGAATGAGCAGGTGAAAGAAAGTTCCAGCAATAGCTCAAACATGAGCACCATTTACGCTGGAGGAGGGTGTCATATTAGCAGCATGATGGAAAATGCAAGTTTCTCGTGGGAGGGTGACAACAAATTTGACCCTTTGTTTCAGTTCCAAGTAAATGCCACAAAATCCGAGGATTTCAAGACAAGTCCATGGGAAGAGGGGCAGCTTCAGACTCGCAATTCTATAGATTTCACTAGCTTTCCATTAACTTCACTTTCAGAAGATCTAACCGGGGAAAATTTTGATGTATTTCAGCATATATGA 852 0.412 MKWAQIAAQLPGRTDNEIKNFWNSCLKKKLLKQGIDPNTHKPLTEGHVKEEKKITETAPMQTPLSQGLSVPLTFPSSQGTTLLIDSNYYDGGLTEASREMFLNKPALDPLSYYDFPMGAAQSGFNLPMSQYHTSLKASDQSPFGPNSSYGFLSLPSLTNSDHGNVSVTEFSDNNSASKISSLLMNEQVKESSSNSSNMSTIYAGGGCHISSMMENASFSWEGDNKFDPLFQFQVNATKSEDFKTSPWEEGQLQTRNSIDFTSFPLTSLSEDLTGENFDVFQHI 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00622 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 30 IPR017930 -
Vimu7g00622 283 Gene3D - 1 57 - -
Vimu7g00622 283 SUPERFAMILY Homeodomain-like 2 37 IPR009057 -
Vimu7g00622 283 ProSiteProfiles Myb-like domain profile. 1 26 IPR001005 -
Vimu7g00622 283 CDD SANT 2 23 IPR001005 -
Vimu7g00622 283 PANTHER MYB DOMAIN PROTEIN 55 2 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00622 Vimu-Chr7 6232526 6233510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00622 2 51 MYB Transcription Factor Family AT1G57560 76.000 4.27e-20 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vimu7g00622 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00622 K09422 - gmx:100811140 513.842